Gene SO_A0039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_A0039 
Symbol 
ID1172634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004349 
Strand
Start bp29574 
End bp30668 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content44% 
IMG OID637346498 
Producthypothetical protein 
Protein accessionNP_720375 
Protein GI118725027 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATCGTTGATA TAAATTTCTT TTGGAGCTGG TACGAGAAGG AATACTCAGA GCTAGAAATT 
TATGTAACCG TGATTGATGG TGTATTAACT AAAGTGCGTT TTTCTGATTG TCCCTATCAT
TTTTCTGACG ATATCGTTTT GACCTTTGAA GAAGTCAAAG CGAAAAAGCC GCATTTTACC
TATGCACAAG TTAAACAGGC ATTGTTAGAC GGCTATTTAT GCCCGTTGTC GAACGATTCA
AAAGCGCCAG AGCCAACACC ACCAAACGAT GACAACACCC GCAAAGTGGT TAGTTTTGGC
GATTTCCAAG ATCGCCTAGA AAGCAAGCGC GACCGCTTAG AGAACGCCTC AAGCAAAGCG
GCGGCAGAAT CAAACAAATT TTATGAGTCG TCTAGAAGCC TTGCTTCTTG TATTCCGTTC
GGCCAGCCGA TTTTAGTGGG GCACCATAGC GAGGGACGCG CTAGACGCCA CGCAGACAAG
ATTTTTAATG ATATGGGTAA ATCTGTTGCG GCAAGCAAAA AAGCGGGTTA TTACGCTGAC
AGAGCGGCCA GCGTTGGCAC TAATGGCATT GCATCGGATG ATCCCGAAGC TATCGCCAAA
CTAAAAGAAA AACTCGCAGG CTTGGAGCGT TCACAAGAAA CGATGAAAGC GATCAATAAA
GTTATCCGCT CTAAGCATAT GACGGACGCC GACAAAATCG AGTACATGAC GCAAACGCAT
AAGCTAACCG AAAAAGAAGC GGAAGAATTA CTAAAGGGGG ATTTTTGCGG TCGGGTAGGG
TTTGCTAGTT ACTCAATCGC AAATAACAGC GCGACTATTC GCACCGTAAG GGATCGAATT
GAAGATTTGG AAAAGTTACA CAATCAAGAG GCACTGAGTG CAAGCGGCAA AATTGAGGGG
CTTTCTTGGG CGTTATATGA GGAAGATGGA CGCATTAAAA TCACTTTTGA TGATATACCT
AGCGAGGCGC TACGGTTAAC AATAAAAAAC TATGCTTTTA AATGGTCGCG ATATTCTAAA
GCTTGGGTTC GTAAAATAAC ACCTAATGCC ATTTATAGCG CAAAACAGTT AATCGGTAAG
CTTACCGAAA ATTAG
 
Protein sequence
MVDINFFWSW YEKEYSELEI YVTVIDGVLT KVRFSDCPYH FSDDIVLTFE EVKAKKPHFT 
YAQVKQALLD GYLCPLSNDS KAPEPTPPND DNTRKVVSFG DFQDRLESKR DRLENASSKA
AAESNKFYES SRSLASCIPF GQPILVGHHS EGRARRHADK IFNDMGKSVA ASKKAGYYAD
RAASVGTNGI ASDDPEAIAK LKEKLAGLER SQETMKAINK VIRSKHMTDA DKIEYMTQTH
KLTEKEAEEL LKGDFCGRVG FASYSIANNS ATIRTVRDRI EDLEKLHNQE ALSASGKIEG
LSWALYEEDG RIKITFDDIP SEALRLTIKN YAFKWSRYSK AWVRKITPNA IYSAKQLIGK
LTEN