Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_A0039 |
Symbol | |
ID | 1172634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004349 |
Strand | + |
Start bp | 29574 |
End bp | 30668 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637346498 |
Product | hypothetical protein |
Protein accession | NP_720375 |
Protein GI | 118725027 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATCGTTGATA TAAATTTCTT TTGGAGCTGG TACGAGAAGG AATACTCAGA GCTAGAAATT TATGTAACCG TGATTGATGG TGTATTAACT AAAGTGCGTT TTTCTGATTG TCCCTATCAT TTTTCTGACG ATATCGTTTT GACCTTTGAA GAAGTCAAAG CGAAAAAGCC GCATTTTACC TATGCACAAG TTAAACAGGC ATTGTTAGAC GGCTATTTAT GCCCGTTGTC GAACGATTCA AAAGCGCCAG AGCCAACACC ACCAAACGAT GACAACACCC GCAAAGTGGT TAGTTTTGGC GATTTCCAAG ATCGCCTAGA AAGCAAGCGC GACCGCTTAG AGAACGCCTC AAGCAAAGCG GCGGCAGAAT CAAACAAATT TTATGAGTCG TCTAGAAGCC TTGCTTCTTG TATTCCGTTC GGCCAGCCGA TTTTAGTGGG GCACCATAGC GAGGGACGCG CTAGACGCCA CGCAGACAAG ATTTTTAATG ATATGGGTAA ATCTGTTGCG GCAAGCAAAA AAGCGGGTTA TTACGCTGAC AGAGCGGCCA GCGTTGGCAC TAATGGCATT GCATCGGATG ATCCCGAAGC TATCGCCAAA CTAAAAGAAA AACTCGCAGG CTTGGAGCGT TCACAAGAAA CGATGAAAGC GATCAATAAA GTTATCCGCT CTAAGCATAT GACGGACGCC GACAAAATCG AGTACATGAC GCAAACGCAT AAGCTAACCG AAAAAGAAGC GGAAGAATTA CTAAAGGGGG ATTTTTGCGG TCGGGTAGGG TTTGCTAGTT ACTCAATCGC AAATAACAGC GCGACTATTC GCACCGTAAG GGATCGAATT GAAGATTTGG AAAAGTTACA CAATCAAGAG GCACTGAGTG CAAGCGGCAA AATTGAGGGG CTTTCTTGGG CGTTATATGA GGAAGATGGA CGCATTAAAA TCACTTTTGA TGATATACCT AGCGAGGCGC TACGGTTAAC AATAAAAAAC TATGCTTTTA AATGGTCGCG ATATTCTAAA GCTTGGGTTC GTAAAATAAC ACCTAATGCC ATTTATAGCG CAAAACAGTT AATCGGTAAG CTTACCGAAA ATTAG
|
Protein sequence | MVDINFFWSW YEKEYSELEI YVTVIDGVLT KVRFSDCPYH FSDDIVLTFE EVKAKKPHFT YAQVKQALLD GYLCPLSNDS KAPEPTPPND DNTRKVVSFG DFQDRLESKR DRLENASSKA AAESNKFYES SRSLASCIPF GQPILVGHHS EGRARRHADK IFNDMGKSVA ASKKAGYYAD RAASVGTNGI ASDDPEAIAK LKEKLAGLER SQETMKAINK VIRSKHMTDA DKIEYMTQTH KLTEKEAEEL LKGDFCGRVG FASYSIANNS ATIRTVRDRI EDLEKLHNQE ALSASGKIEG LSWALYEEDG RIKITFDDIP SEALRLTIKN YAFKWSRYSK AWVRKITPNA IYSAKQLIGK LTEN
|
| |