11 homologs were found in PanDaTox collection
for query gene Avi_1966 on replicon NC_011989
Organism: Agrobacterium vitis S4



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011989  Avi_1966  Phage terminase protein  100 
 
 		 155 aa  321  3e-87  Agrobacterium vitis S4  Bacteria  normal  0.358239  n/a   
 
 
-
 
NC_007406  Nwi_1547  hypothetical protein  35.67 
 
 		 156 aa  92.8  2e-18  Nitrobacter winogradskyi Nb-255  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007493  RSP_1651  hypothetical protein  33.57 
 
 		 145 aa  63.9  0.0000000008  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_002947  PP_3882  phage terminase, small subunit, putative  28.87 
 
 		 155 aa  52.4  0.000002  Pseudomonas putida KT2440  Bacteria  normal  0.686092  hitchhiker  0.00346128 
 
 
-
 
NC_011094  SeSA_A4461  putative phage terminase, small subunit, P27 family  31.25 
 
 		 154 aa  49.7  0.00002  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  hitchhiker  0.00000187625 
 
 
-
 
NC_010498  EcSMS35_1185  P27 family phage terminase small subunit  30.12 
 
 		 160 aa  44.7  0.0005  Escherichia coli SMS-3-5  Bacteria  normal  0.133965  hitchhiker  0.000000000518622 
 
 
-
 
NC_011663  Sbal223_2597  phage terminase, small subunit, , P27 family  28.33 
 
 		 170 aa  44.3  0.0006  Shewanella baltica OS223  Bacteria  normal  0.115209  normal  0.0515475 
 
 
-
 
NC_011769  DvMF_1659  putative phage terminase, small subunit, P27 family  37.1 
 
 		 157 aa  43.5  0.001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  1 
 
 
-
 
NC_004347  SO_2968  phage terminase small subunit  27.68 
 
 		 170 aa  42.7  0.002  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011894  Mnod_7333  phage terminase, small subunit, , P27 family  27.63 
 
 		 152 aa  42  0.003  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.367321  n/a   
 
 
-
 
NC_013037  Dfer_5504  phage terminase, small subunit, , P27 family  25.51 
 
 		 144 aa  42  0.003  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>