13 homologs were found in PanDaTox collection
for query gene Amir_5230 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013093  Amir_5230  RNA polymerase, sigma-24 subunit, ECF subfamily  100 
 
 		 142 aa  271  2.0000000000000002e-72  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
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NC_013093  Amir_5228  RNA polymerase, sigma-24 subunit, ECF subfamily  43.71 
 
 		 179 aa  101  3e-21  Actinosynnema mirum DSM 43827  Bacteria  normal  0.926896  n/a   
 
 
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NC_013093  Amir_2579  RNA polymerase, sigma-24 subunit, ECF subfamily  41.01 
 
 		 206 aa  81.3  0.000000000000004  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0189984  n/a   
 
 
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NC_009664  Krad_0794  RNA polymerase, sigma-24 subunit, ECF subfamily  33.33 
 
 		 247 aa  52  0.000003  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.713828  normal  0.175272 
 
 
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NC_014158  Tpau_3078  RNA polymerase, sigma-24 subunit, ECF subfamily  29.19 
 
 		 189 aa  49.3  0.00002  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
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NC_009664  Krad_2382  RNA polymerase, sigma-24 subunit, ECF subfamily  41.89 
 
 		 207 aa  48.5  0.00003  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
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NC_009921  Franean1_5072  ECF subfamily RNA polymerase sigma-24 factor  31.65 
 
 		 211 aa  46.6  0.0001  Frankia sp. EAN1pec  Bacteria  normal  0.144386  normal  0.0360395 
 
 
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NC_011831  Cagg_0898  RNA polymerase, sigma-24 subunit, ECF subfamily  27.88 
 
 		 202 aa  45.8  0.0002  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00206828  hitchhiker  0.00000031369 
 
 
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NC_013595  Sros_2247  RNA polymerase, sigma-24 subunit, ECF subfamily  29.27 
 
 		 211 aa  45.8  0.0002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.596696  normal  0.425271 
 
 
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NC_013093  Amir_2602  RNA polymerase, sigma-24 subunit, ECF subfamily  55.32 
 
 		 89 aa  45.1  0.0004  Actinosynnema mirum DSM 43827  Bacteria  normal  0.146882  n/a   
 
 
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NC_013595  Sros_0087  RNA polymerase, sigma-24 subunit, ECF subfamily  28.74 
 
 		 207 aa  43.9  0.0008  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
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NC_009664  Krad_2767  RNA polymerase, sigma-24 subunit, ECF subfamily  38.75 
 
 		 259 aa  41.6  0.003  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
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NC_011831  Cagg_1599  RNA polymerase, sigma-24 subunit, ECF subfamily  28 
 
 		 194 aa  41.6  0.004  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.521332  normal  1 
 
 
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