Gene Sros_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0087 
Symbol 
ID8663351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp87304 
End bp87927 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content72% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003335886 
Protein GI271961690 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACACG AGAGCCGGAC GGCCGCACCG CCCCGGCCGG CAGCCGCGGA AGCGGCCGAC 
GACGCCGCGG TGATCGAACG GTCCCGGCGT GAGCCCGAAC AGTTCGCCAC CCTGTTCACC
CGCCACGCAC CGGCGCTCAA GCGCTATGTC ATCAGGCGGC TGGGCCAGGA TCCCGCCGAG
GACATCGTCG CCGAGACCTT CACGGTGGCC TTCCAGAGCC TGGAGTCGTA CGACCTGGCC
CGCGACGACG CGCGGCCATG GCTGTACGGC ATCGCCACCA ACCTCATGCG CCGGCACCGC
CGCCGCGAGA TCGGCCTGTA CCGGGCACTG AGCCGCACGG GGGCGGATTC AGTGGTCGAG
CCGTTCACCG ACCAGGTCGA TCAGCGGGTG GCCGCGGACG GAGCGCGGCG CCGGCTCGCC
GCGGCGCTGG CGGGGCTCCC GCGGGGGCAC CGCGACGTGC TGCTGCTGGT GGCGTGGGCG
GAGCTCACCT ACGAGCAGGC CGCACAGGCA CTCGGTGTTC CGGTGGGGAC GGTCCGTTCG
CGGGTCAGCC GGGCTCGGAA AAAGCTGCGC CGGGTGCTCG GTGACATCGA TCCAACCTCC
GCGAGCGAAG GAACGAACAG TTGA
 
Protein sequence
MRHESRTAAP PRPAAAEAAD DAAVIERSRR EPEQFATLFT RHAPALKRYV IRRLGQDPAE 
DIVAETFTVA FQSLESYDLA RDDARPWLYG IATNLMRRHR RREIGLYRAL SRTGADSVVE
PFTDQVDQRV AADGARRRLA AALAGLPRGH RDVLLLVAWA ELTYEQAAQA LGVPVGTVRS
RVSRARKKLR RVLGDIDPTS ASEGTNS