| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5228 |
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| Symbol | |
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| ID | 8329430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 6223507 |
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| End bp | 6224046 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644945667 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003102895 |
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| Protein GI | 256379235 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.926896 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAATCGG ACGCCGAGCT CTGGGAGCGG GGCGACCGGG CCGCGTTCTC CGCGCTGTTC
GAGCGGCACG CCGAGGCCGT GTGGAACCAC GCCTACCGGC TCACCGCGTC CTGGGCGCTC
GCCGAGGACC TCACCTCCTC GGTCTTCCTC ACCGCCTGGC GCAAGCGCGC CGAGGTGACG
CTCGTGCGCG ACAGCGCCCT GCCGTGGCTG TACAGCGTCG CGGGCAACCT GGCGCGCACC
GAGTTCCGCC GCGTCGGCCG CTTCCGCCGC GCGCTGCTGC GCGTCCCCTC CCCCGGCGTC
GTCCCGGACC ACGCCGAGCA CGTCGCGTCC GCCGTGGACG GCGAGCGCTC GCTCAAGCGG
GTGCTCGCGC TGCTGGAGAC CATGCCGAAG GCCGAGCGGG AGGCCGTCGA GCTGTGCCTG
CTCGGCGAGC TGGGCACGAC CGAGGCCGCC GAGCTGCTGG GGGTCGCCGA GGTGAGCGTG
CGCTCCCGGA TCAGCCGGGC CCGCGCCCGC CTGCGCGCCG GGGCGGAGGA GGCCCGATGA
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| Protein sequence | MESDAELWER GDRAAFSALF ERHAEAVWNH AYRLTASWAL AEDLTSSVFL TAWRKRAEVT
LVRDSALPWL YSVAGNLART EFRRVGRFRR ALLRVPSPGV VPDHAEHVAS AVDGERSLKR
VLALLETMPK AEREAVELCL LGELGTTEAA ELLGVAEVSV RSRISRARAR LRAGAEEAR
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