9 homologs were found in PanDaTox collection
for query gene YpsIP31758_A0059 on replicon NC_009704
Organism: Yersinia pseudotuberculosis IP 31758



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009704  YpsIP31758_A0059  putative secretion system protein PilL  100 
 
 
310 aa  624  1e-178  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_011081  SeHA_A0119  PilL protein  28.79 
 
 
355 aa  111  2.0000000000000002e-23  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_009788  EcE24377A_D0051  PilL protein  28.41 
 
 
355 aa  105  1e-21  Escherichia coli E24377A  Bacteria  normal  0.107454  n/a   
 
 
-
 
NC_009705  YpsIP31758_B0013  type IV pilus biosynthesis protein PilL  26.06 
 
 
388 aa  89.4  6e-17  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_3736  pilus biogenesis protein  40.43 
 
 
356 aa  87.8  2e-16  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_59240  type IV B pilus protein  35.11 
 
 
374 aa  69.3  0.00000000008  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.000264935  hitchhiker  0.0000258548 
 
 
-
 
NC_009656  PSPA7_4470  type IV B pilus protein  34.38 
 
 
374 aa  68.2  0.0000000002  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0623  putative type IV pilus protein  28.17 
 
 
447 aa  56.2  0.0000007  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1518  hypothetical protein  28.04 
 
 
377 aa  50.4  0.00004  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.612277  normal  0.106236 
 
 
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