Gene YpsIP31758_B0013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_B0013 
Symbol 
ID5384187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009705 
Strand+ 
Start bp17749 
End bp18915 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content39% 
IMG OID640857122 
Producttype IV pilus biosynthesis protein PilL 
Protein accessionYP_001393311 
Protein GI153930669 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAACA AAAACCTAAC GGTAGCTATT ATCGCTACGC TGGGTATTTC TTGCGTAAGT 
TTTAATGTGA ATGCGGATTT TAATGTAGTA GAAGATTTTA GCAATGATTA TTCACGCGGC 
TACAATCCTC AAATACAAAC ATCTTCTTCA GCACAATACC AACCGCTGCC GCGCTCGATA 
CGCATTGATG ATGGACAATC TACTGGATAC CGTAGCGCGG TATCCAGTCA TTCATCTATG 
CTTAGAAACA ACCCACAAAA ACCAGAAAAT ATTGCTGTAC CGCAATACCC CGCGACACAA 
ACCAAATCAA CACCACCAAA AGTATTATAT TCGGAATCAT CAGCACGTCC GCAATCCCCT 
GTTAACACGC TACAGAACTC AGGTAGCCCT ACCTATTTAA AAAATATTAT CTATGTAGGT 
CATGCCAGAC AGAGTGATAT TTACGTAGAA ACAAAAGCGG GGCAACAGCA AACGTTAAAA 
ACAGCAATAA AAACTCTTAT TCCTAAATCA TTTTCAGTTG AATTCTCTTT AGATTTAGAG 
AGAGCAACAC CGCAACTCAA CGTTAACTGG AATAGTGGCG ACTTATGGAC AGTTACCGTT 
GACAAGATTC TGGGTGATAA TAATCTGGTT GCCTTAATAA ATTGGGATTC AAACCGCATT 
TCAGTGGCCT ATAGAAATGC AAATACAAAA TTAATTTCAA CCCCCGTCTT TGGGCAAGAT 
AACTCAAAAA ATCAATTGAT GGTTAAAAAT GTATTACCAG AAAATAATAA ATTATTGACC 
ACAGATACAA AACAAACCAT GTCTTTTCCG ACCAAAACCC CAGCTCCGCT TACCGCAAAT 
ACTCCATTGG TTAAACAACC TACAATTATA ATACCGCCGC CAGTCACATT AAAAAACTGG 
ACATCAAGAT CAGGTATTAC CTTAAAAGTC ATGATTCAAG AGTGGACAGA AAAACAGGGC 
TGGAAATTAG TTTGGCGAGC AGATAAAGAC TACGACATCC TTGTGCCATT CACTGTGTAC 
TCCAAATCAG ATAATGATGC TGGTTATATG GAAGCTATGC AAAAAGCATT CTCACTTTAT 
GAAAAAGCAC AATATCCCTT CAGGGTCGAA CTCTACCCAG ACCAGCGACT CCTGTTCGTC 
ACTCTTAAAA GCGATAACAA GAATTAA
 
Protein sequence
MNNKNLTVAI IATLGISCVS FNVNADFNVV EDFSNDYSRG YNPQIQTSSS AQYQPLPRSI 
RIDDGQSTGY RSAVSSHSSM LRNNPQKPEN IAVPQYPATQ TKSTPPKVLY SESSARPQSP 
VNTLQNSGSP TYLKNIIYVG HARQSDIYVE TKAGQQQTLK TAIKTLIPKS FSVEFSLDLE 
RATPQLNVNW NSGDLWTVTV DKILGDNNLV ALINWDSNRI SVAYRNANTK LISTPVFGQD 
NSKNQLMVKN VLPENNKLLT TDTKQTMSFP TKTPAPLTAN TPLVKQPTII IPPPVTLKNW 
TSRSGITLKV MIQEWTEKQG WKLVWRADKD YDILVPFTVY SKSDNDAGYM EAMQKAFSLY 
EKAQYPFRVE LYPDQRLLFV TLKSDNKN