Gene Pecwa_0623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_0623 
Symbol 
ID8528988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand
Start bp665007 
End bp666350 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content54% 
IMG OID 
Productputative type IV pilus protein 
Protein accessionYP_003258054 
Protein GI261819948 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAGAC CTATGCGGCA CCCTCGAAAT ACGCCAGCTA CGACGACGCT GGCATGCCTT 
TCTGCTGCAA TGCTGGTAGT GGGGTGCGCA CAACAAACAA CCTCTTCAGT TTCCCGCCCG
GCTGTGCAGC CAAGGACGAA CGATATTTAT CAAAATCGTT CACCTGAAGT CGTGCGTTAT
GACCGTTACA CACTGGTCAG CACTCGCCCT GCAGATTCAC AACGCGATCC ACTCAACCAA
ATGATCGACA TCACGATGCC GCCGCAACTG GTGCGTAGTG TCGGGGATGG ATTTCGTTAT
TTGTTGTTAG AGTCTGGCTA TTCGCTGTGC CCCTCAACGT CATCAACGTT TTCTGAGCTT
CTTGGTCGAC CTTTGCCAGG TGTCCAGCGC AATATCGGTC CGGTTCGTCT CAGTGAAGCG
TTGCAGATAG TTGCGGGGCC CGCGTGGCGG CTACGCGTTG ACGATGTGAA TCGTGAAGTC
TGCTTTGCTC TGCGTGATGA ATATCGTTCG TTTGCACCGG CCGCTTCTGC ATCATTGTCT
ACTTCCCCCG TTAAATCGGC CATTTCTGTC CCGCCTCGCA CTTCCGGAAA TCCTTTTACG
AATCCTGAGG CGCAGACGAA ATCAGGCATG TTAAAACCGG ACAGCCAACC CTTACCTGTA
CCAACCCTGA CAACGCTTTC GCCGACAGCG ACAGAGAGTA AACCTTCGGT ATTGGTTACG
GGGGTACCTG TTTCTGTGAA CAGGCCGGTC GCTGCTGCCG CCATATCGAA ACTTTCTGCT
GCCGCCCAAA CAGCCCCGTT GTCTGCGCTG CCATCACCTG TCAAATCCTC AGTCGCTCCA
GCTCCAGCTG CAAAATCAAA CTTAGCACCG ACGACAGCAT TGCCGCCGGC TCCTGTAGTG
CAGCCGCCAA AAAAAGATGA AACGGCAAAG TTGCTTTCGA CGCCGTCTAA GACGAGCCCG
GCAGTAGCTG CACCTATGGT CCCGGCGCCA GTAGCGTCTC CAGCCCTAGC TTCTGAACCT
AAGTCCGCAC CAGTTATTAC ACCCGTCTGG AAGGCAGAGC CGGGCACCAC CACATTACGT
GAATTTTTGA CACGCCAGGC CTCCACAGTG GATTGCCCGT ATGGCGGGAA ATGGGCTGTA
GTTTGGCCGA TCAATGTCGA TTACCCCCTT CCACCTCGGC TGGTCATTCA TGGCAGTTTC
GATGCATTTG TGAACCGCAT TTTTTATTTA TACGGGCCAG AAAGGGTAGA TGGGAAAGTG
GATACCCCGC TCTATGGTCT CGCTAACCGC AGCCAATGTG TTGTGGTGGT CTCTGATAAA
CCCCTCAGAA CAGGACTGAA CTGA
 
Protein sequence
MTRPMRHPRN TPATTTLACL SAAMLVVGCA QQTTSSVSRP AVQPRTNDIY QNRSPEVVRY 
DRYTLVSTRP ADSQRDPLNQ MIDITMPPQL VRSVGDGFRY LLLESGYSLC PSTSSTFSEL
LGRPLPGVQR NIGPVRLSEA LQIVAGPAWR LRVDDVNREV CFALRDEYRS FAPAASASLS
TSPVKSAISV PPRTSGNPFT NPEAQTKSGM LKPDSQPLPV PTLTTLSPTA TESKPSVLVT
GVPVSVNRPV AAAAISKLSA AAQTAPLSAL PSPVKSSVAP APAAKSNLAP TTALPPAPVV
QPPKKDETAK LLSTPSKTSP AVAAPMVPAP VASPALASEP KSAPVITPVW KAEPGTTTLR
EFLTRQASTV DCPYGGKWAV VWPINVDYPL PPRLVIHGSF DAFVNRIFYL YGPERVDGKV
DTPLYGLANR SQCVVVVSDK PLRTGLN