Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_0623 |
Symbol | |
ID | 8528988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 665007 |
End bp | 666350 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | putative type IV pilus protein |
Protein accession | YP_003258054 |
Protein GI | 261819948 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAGAC CTATGCGGCA CCCTCGAAAT ACGCCAGCTA CGACGACGCT GGCATGCCTT TCTGCTGCAA TGCTGGTAGT GGGGTGCGCA CAACAAACAA CCTCTTCAGT TTCCCGCCCG GCTGTGCAGC CAAGGACGAA CGATATTTAT CAAAATCGTT CACCTGAAGT CGTGCGTTAT GACCGTTACA CACTGGTCAG CACTCGCCCT GCAGATTCAC AACGCGATCC ACTCAACCAA ATGATCGACA TCACGATGCC GCCGCAACTG GTGCGTAGTG TCGGGGATGG ATTTCGTTAT TTGTTGTTAG AGTCTGGCTA TTCGCTGTGC CCCTCAACGT CATCAACGTT TTCTGAGCTT CTTGGTCGAC CTTTGCCAGG TGTCCAGCGC AATATCGGTC CGGTTCGTCT CAGTGAAGCG TTGCAGATAG TTGCGGGGCC CGCGTGGCGG CTACGCGTTG ACGATGTGAA TCGTGAAGTC TGCTTTGCTC TGCGTGATGA ATATCGTTCG TTTGCACCGG CCGCTTCTGC ATCATTGTCT ACTTCCCCCG TTAAATCGGC CATTTCTGTC CCGCCTCGCA CTTCCGGAAA TCCTTTTACG AATCCTGAGG CGCAGACGAA ATCAGGCATG TTAAAACCGG ACAGCCAACC CTTACCTGTA CCAACCCTGA CAACGCTTTC GCCGACAGCG ACAGAGAGTA AACCTTCGGT ATTGGTTACG GGGGTACCTG TTTCTGTGAA CAGGCCGGTC GCTGCTGCCG CCATATCGAA ACTTTCTGCT GCCGCCCAAA CAGCCCCGTT GTCTGCGCTG CCATCACCTG TCAAATCCTC AGTCGCTCCA GCTCCAGCTG CAAAATCAAA CTTAGCACCG ACGACAGCAT TGCCGCCGGC TCCTGTAGTG CAGCCGCCAA AAAAAGATGA AACGGCAAAG TTGCTTTCGA CGCCGTCTAA GACGAGCCCG GCAGTAGCTG CACCTATGGT CCCGGCGCCA GTAGCGTCTC CAGCCCTAGC TTCTGAACCT AAGTCCGCAC CAGTTATTAC ACCCGTCTGG AAGGCAGAGC CGGGCACCAC CACATTACGT GAATTTTTGA CACGCCAGGC CTCCACAGTG GATTGCCCGT ATGGCGGGAA ATGGGCTGTA GTTTGGCCGA TCAATGTCGA TTACCCCCTT CCACCTCGGC TGGTCATTCA TGGCAGTTTC GATGCATTTG TGAACCGCAT TTTTTATTTA TACGGGCCAG AAAGGGTAGA TGGGAAAGTG GATACCCCGC TCTATGGTCT CGCTAACCGC AGCCAATGTG TTGTGGTGGT CTCTGATAAA CCCCTCAGAA CAGGACTGAA CTGA
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Protein sequence | MTRPMRHPRN TPATTTLACL SAAMLVVGCA QQTTSSVSRP AVQPRTNDIY QNRSPEVVRY DRYTLVSTRP ADSQRDPLNQ MIDITMPPQL VRSVGDGFRY LLLESGYSLC PSTSSTFSEL LGRPLPGVQR NIGPVRLSEA LQIVAGPAWR LRVDDVNREV CFALRDEYRS FAPAASASLS TSPVKSAISV PPRTSGNPFT NPEAQTKSGM LKPDSQPLPV PTLTTLSPTA TESKPSVLVT GVPVSVNRPV AAAAISKLSA AAQTAPLSAL PSPVKSSVAP APAAKSNLAP TTALPPAPVV QPPKKDETAK LLSTPSKTSP AVAAPMVPAP VASPALASEP KSAPVITPVW KAEPGTTTLR EFLTRQASTV DCPYGGKWAV VWPINVDYPL PPRLVIHGSF DAFVNRIFYL YGPERVDGKV DTPLYGLANR SQCVVVVSDK PLRTGLN
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