5 homologs were found in PanDaTox collection
for query gene Tpau_4093 on replicon NC_014158
Organism: Tsukamurella paurometabola DSM 20162



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014158  Tpau_4093  GP41 protein  100 
 
 
280 aa  558  1e-158  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.403988  n/a   
 
 
-
 
NC_013441  Gbro_3437  integrase family protein  35.24 
 
 
458 aa  53.1  0.000004  Gordonia bronchialis DSM 43247  Bacteria  normal  0.494815  n/a   
 
 
-
 
NC_014212  Mesil_1179  integrase family protein  27.81 
 
 
387 aa  49.3  0.00008  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.208584 
 
 
-
 
NC_008726  Mvan_3269  phage integrase family protein  41.67 
 
 
465 aa  44.7  0.002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_0476  integrase family protein  28.57 
 
 
371 aa  44.3  0.002  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
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