Gene Namu_0476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0476 
Symbol 
ID8446057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp525801 
End bp526916 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content68% 
IMG OID645039610 
Productintegrase family protein 
Protein accessionYP_003199884 
Protein GI258650728 
COG category[L] Replication, recombination and repair 
COG ID[COG4973] Site-specific recombinase XerC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGTC GGAATGCCGT CGGTGAGGGC AGCGTCTACC AACGCAAGGA CGGCCGCTGG 
GTCGCTGCCG CCTACGTCCC GGTCGCCGAC GGCACCTACC GGCGCGTCTC GCACTACGTC
AGGACCAAGG CCGACGCCAA GGCCAAGCTC CGTGAGATGA ATGACCGGGC CGCGAAGAAC
ATGCCGGCGC CACCGCCGTC GCTGACCGTC GAGGCCTACC TCGGCGAGTG GCTCACGCAC
ATGAAGCAGC ACGTCCGGCG CAGCACGTGG GTGGCCTACG AGTCCAACGC TCGGCTGCAT
ATCGTGCCGC GGATCGGCCG CAAGAAGCTG TCGCAGCTAT CGGTCCGCGA CGTCCGGCTG
ATGATCGACG GCCTGCGCAA GGACGGTAAG GGCAAACGGA CCGTCCAATA CGTGCACGCC
ACCCTTCGCG CGGCTCTGGA GCACGCCTAC CGCGAGGAAC TCGTCACTCG GAACGTCGCC
AAGATGGTCC GCGTCGAGCG GCCGACCCCG ACGCCGAAGG AGCCGCTCAG CGTCGCGGAG
GCGCGCAGGC TGCTCACCGC GACGCGCGAC GACGAGGACC ACGCGCTCTG GGTCGTCATG
CTGCTCCTCG GCCTGCGCCG AAGCGAGGTG TGCGGCCTCA GGTGGGACAA CGTCGACCTG
GAGAACCGGA CCCTCAGCGT CACCCACAGC GTGCAGCGGG TCGATGGCAA ACTCCGCGAG
CTGCCGACCA AGACCAGGCG CTCAACCAGG ACGGTGCCGC TGCCGGCCAT GGTCCACCAG
GCGCTGGTCA CCCACCGGGC CGCAATGATG CCGACCAGCC AGTACCTCCC CGAGCCGGTC
TACGTGTTCG GCACCAAGAT CGGCACGCCG ATGGAGCCGC GAAACCTGAC CCGGCGCTGG
GTCACCTTGG CCGAGCGGCA GGGGATCCGC CGAGTGCCTC TCCACGCGCT CAGGCACTCC
TGCGTTTCCC TCCTCCTTGC CCAAGGCGTG CACCCACGCA CGGTGATGGA GATCGTCGGG
CACAGCGCCA TCGAAATGAC CATGAACGTC TACGGCCACG TCAACCTGGA GACCCAGAGG
AGGGCACTCG ATGAACTCGA CCGAACGCTG CGGTAG
 
Protein sequence
MSGRNAVGEG SVYQRKDGRW VAAAYVPVAD GTYRRVSHYV RTKADAKAKL REMNDRAAKN 
MPAPPPSLTV EAYLGEWLTH MKQHVRRSTW VAYESNARLH IVPRIGRKKL SQLSVRDVRL
MIDGLRKDGK GKRTVQYVHA TLRAALEHAY REELVTRNVA KMVRVERPTP TPKEPLSVAE
ARRLLTATRD DEDHALWVVM LLLGLRRSEV CGLRWDNVDL ENRTLSVTHS VQRVDGKLRE
LPTKTRRSTR TVPLPAMVHQ ALVTHRAAMM PTSQYLPEPV YVFGTKIGTP MEPRNLTRRW
VTLAERQGIR RVPLHALRHS CVSLLLAQGV HPRTVMEIVG HSAIEMTMNV YGHVNLETQR
RALDELDRTL R