35 homologs were found in PanDaTox collection
for query gene Tmz1t_R0010 on replicon NC_011662
Organism: Thauera sp. MZ1T



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011662  Tmz1t_R0010  SRP RNA; RNA component of signal recognitionparti cle  100 
 
 		 106 bp  210  5e-53  Thauera sp. MZ1T  Bacteria  normal  0.33139  n/a   
 
 
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NC_007298  Daro_R0032  SRP RNA, RNA component of signal recognition particle  87.63 
 
 		 101 bp  97.6  5e-19  Dechloromonas aromatica RCB  Bacteria  normal  0.116447  unclonable  0.0000000450156 
 
 
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NC_007614  Nmul_AR0033  4.5S ribosomal RNA component of signal recognition particle (SRP)  86 
 
 		 104 bp  87.7  5e-16  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.898057  n/a   
 
 
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NC_007492  Pfl01_R30  SRP RNA; RNA component of signal recognition particle  97.3 
 
 		 117 bp  65.9  0.000000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.331058  normal  1 
 
 
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NC_008025  Dgeo_R0056  SRP RNA; RNA component of signal recognition particle  100 
 
 		 106 bp  63.9  0.000000007  Deinococcus geothermalis DSM 11300  Bacteria  hitchhiker  0.0000625085  normal  0.583061 
 
 
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NC_012856  Rpic12D_R0020  SRP RNA; RNA component of signal recognitionparti cle  84.93 
 
 		 104 bp  58  0.0000005  Ralstonia pickettii 12D  Bacteria  normal  1  normal  0.330049 
 
 
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NC_007973  Rmet_R0026  SRP RNA; RNA component of signal recognition particle  82.61 
 
 		 104 bp  56  0.000002  Cupriavidus metallidurans CH34  Bacteria  normal  0.283025  normal  0.297778 
 
 
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NC_014212  Mesil_R0019  SRP RNA; RNA component of signal recognition particle  96.77 
 
 		 107 bp  54  0.000007  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  0.0274413 
 
 
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NC_010084  Bmul_R0038  SRP RNA; RNA component of signal recognition particle  84 
 
 		 103 bp  54  0.000007  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0368326  normal  0.266058 
 
 
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NC_007404  Tbd_R0014  SRP RNA; RNA component of signal recognitionparticle  87.3 
 
 		 99 bp  54  0.000007  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  0.243503 
 
 
-
 
NC_008709  Ping_R0084  SRP RNA  96.67 
 
 		 116 bp  52  0.00003  Psychromonas ingrahamii 37  Bacteria  decreased coverage  0.0000267785  normal  0.896198 
 
 
-
 
NC_007947  Mfla_R0040  SRP RNA; RNA component of signal recognition particle  85.25 
 
 		 101 bp  50.1  0.0001  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.000585528  hitchhiker  0.00000253455 
 
 
-
 
NC_007005  Psyr_RNA34  SRP RNA; RNA component of signal recognition particle  91.89 
 
 		 117 bp  50.1  0.0001  Pseudomonas syringae pv. syringae B728a  Bacteria  hitchhiker  0.00314643  normal  1 
 
 
-
 
NC_010483  TRQ2_R0052  SRP RNA; RNA component of signal recognition particle  93.94 
 
 		 105 bp  50.1  0.0001  Thermotoga sp. RQ2  Bacteria  normal  1  n/a   
 
 
-
 
NC_009484  Acry_R0038  SRP RNA; RNA component of signal recognition particle  96.55 
 
 		 106 bp  50.1  0.0001  Acidiphilium cryptum JF-5  Bacteria  normal  1  n/a   
 
 
-
 
NC_008816  A9601_ffsVIMSS1309389  4.5S RNA component of the signal recognition particle (SRP)  93.75 
 
 		 81 bp  48.1  0.0004  Prochlorococcus marinus str. AS9601  Bacteria  normal  1  n/a   
 
 
-
 
NC_013124  Afer_R0007  SRP RNA; RNA component of signal recognition particle  93.75 
 
 		 110 bp  48.1  0.0004  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.24199  n/a   
 
 
-
 
NC_007794  Saro_R0021  SRP RNA; RNA component of signal recognition particle  93.75 
 
 		 92 bp  48.1  0.0004  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.132266  n/a   
 
 
-
 
NC_010622  Bphy_R0002    82.89 
 
 		 103 bp  48.1  0.0004  Burkholderia phymatum STM815  Bacteria  normal  0.180442  normal  0.539085 
 
 
-
 
NC_010338  Caul_R0010  SRP RNA; RNA component of signal recognition particle  93.75 
 
 		 101 bp  48.1  0.0004  Caulobacter sp. K31  Bacteria  normal  0.767772  normal  1 
 
 
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NC_007577  PMT9312_R0034  SRP RNA  93.75 
 
 		 102 bp  48.1  0.0004  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  1  n/a   
 
 
-
 
NC_009091  P9301_ffsVIMSS1309401  ffs 4.5S RNA component of the signal recognition particle (SRP)  93.75 
 
 		 81 bp  48.1  0.0004  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  1  n/a   
 
 
-
 
NC_009080  BMA10247_3560  signal recognition particle RNA  82.89 
 
 		 102 bp  48.1  0.0004  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_009654  Mmwyl1_R0044  SRP RNA; RNA component of signal recognition particle  93.55 
 
 		 117 bp  46.1  0.002  Marinomonas sp. MWYL1  Bacteria  normal  0.577692  normal  0.0469682 
 
 
-
 
NC_009512  Pput_R0047  SRP RNA; RNA component of signal recognition particle  93.33 
 
 		 117 bp  44.1  0.007  Pseudomonas putida F1  Bacteria  normal  1  normal  0.0796172 
 
 
-
 
NC_008390  Bamb_R0048  SRP RNA; RNA component of signal recognition particle  89.47 
 
 		 105 bp  44.1  0.007  Burkholderia ambifaria AMMD  Bacteria  normal  0.267779  n/a   
 
 
-
 
NC_010322  PputGB1_R0076  SRP RNA; RNA component of signal recognition particle  93.33 
 
 		 117 bp  44.1  0.007  Pseudomonas putida GB-1  Bacteria  normal  0.341917  normal  0.494502 
 
 
-
 
NC_008062  Bcen_R0102  SRP RNA; RNA component of signal recognition particle  89.47 
 
 		 103 bp  44.1  0.007  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0105096  n/a   
 
 
-
 
NC_010501  PputW619_R0058    93.33 
 
 		 117 bp  44.1  0.007  Pseudomonas putida W619  Bacteria  normal  0.334367  normal  1 
 
 
-
 
NC_010508  Bcenmc03_R0048    89.47 
 
 		 103 bp  44.1  0.007  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0344887  normal  0.132073 
 
 
-
 
NC_010551  BamMC406_R0048    89.47 
 
 		 103 bp  44.1  0.007  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0963367  normal  0.0663879 
 
 
-
 
NC_007510  Bcep18194_AR0056  SRP RNA; RNA component of signal recognition particle  89.47 
 
 		 103 bp  44.1  0.007  Burkholderia sp. 383  Bacteria  normal  0.0102004  normal  0.775524 
 
 
-
 
NC_008819  NATL1_ffsVIMSS1309407  4.5S RNA component of the signal recognition particle (SRP)  93.33 
 
 		 97 bp  44.1  0.007  Prochlorococcus marinus str. NATL1A  Bacteria  normal  0.42344  normal  1 
 
 
-
 
NC_008542  Bcen2424_R0046  SRP RNA  89.47 
 
 		 103 bp  44.1  0.007  Burkholderia cenocepacia HI2424  Bacteria  hitchhiker  0.00820406  n/a   
 
 
-
 
NC_007951  Bxe_AR0037  SRP RNA; RNA component of signal recognition particle  82.86 
 
 		 103 bp  44.1  0.007  Burkholderia xenovorans LB400  Bacteria  normal  0.0480154  normal  0.14227 
 
 
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