8 homologs were found in PanDaTox collection
for query gene Ping_R0084 on replicon NC_008709
Organism: Psychromonas ingrahamii 37



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008709  Ping_R0084  SRP RNA  100 
 
 		 116 bp  230  6e-59  Psychromonas ingrahamii 37  Bacteria  decreased coverage  0.0000267785  normal  0.896198 
 
 
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NC_007492  Pfl01_R30  SRP RNA; RNA component of signal recognition particle  100 
 
 		 117 bp  60  0.0000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.331058  normal  1 
 
 
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NC_008025  Dgeo_R0056  SRP RNA; RNA component of signal recognition particle  96.88 
 
 		 106 bp  56  0.000002  Deinococcus geothermalis DSM 11300  Bacteria  hitchhiker  0.0000625085  normal  0.583061 
 
 
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NC_011662  Tmz1t_R0010  SRP RNA; RNA component of signal recognitionparti cle  96.67 
 
 		 106 bp  52  0.00003  Thauera sp. MZ1T  Bacteria  normal  0.33139  n/a   
 
 
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NC_009512  Pput_R0047  SRP RNA; RNA component of signal recognition particle  91.89 
 
 		 117 bp  50.1  0.0001  Pseudomonas putida F1  Bacteria  normal  1  normal  0.0796172 
 
 
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NC_010322  PputGB1_R0076  SRP RNA; RNA component of signal recognition particle  91.89 
 
 		 117 bp  50.1  0.0001  Pseudomonas putida GB-1  Bacteria  normal  0.341917  normal  0.494502 
 
 
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NC_010501  PputW619_R0058    91.89 
 
 		 117 bp  50.1  0.0001  Pseudomonas putida W619  Bacteria  normal  0.334367  normal  1 
 
 
-
 
NC_007005  Psyr_RNA34  SRP RNA; RNA component of signal recognition particle  93.33 
 
 		 117 bp  44.1  0.008  Pseudomonas syringae pv. syringae B728a  Bacteria  hitchhiker  0.00314643  normal  1 
 
 
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