19 homologs were found in PanDaTox collection
for query gene Acry_R0038 on replicon NC_009484
Organism: Acidiphilium cryptum JF-5



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009484  Acry_R0038  SRP RNA; RNA component of signal recognition particle  100 
 
 		 106 bp  210  5e-53  Acidiphilium cryptum JF-5  Bacteria  normal  1  n/a   
 
 
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NC_008686  Pden_R0031  SRP RNA; RNA component of signal recognition particle  93.88 
 
 		 102 bp  73.8  0.000000000008  Paracoccus denitrificans PD1222  Bacteria  normal  0.0666652  normal  0.0491698 
 
 
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NC_007493  RSP_4343  SRP RNA, 4.5S RNA  93.75 
 
 		 101 bp  71.9  0.00000000003  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
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NC_009049  Rsph17029_R0039  SRP RNA; RNA component of signal recognition particle  93.75 
 
 		 101 bp  71.9  0.00000000003  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  0.183217 
 
 
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NC_009428  Rsph17025_R0006  SRP RNA; RNA component of signal recognition particle  93.75 
 
 		 101 bp  71.9  0.00000000003  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0124002  normal  0.42637 
 
 
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NC_007643  Rru_AR0066  SRP RNA, 4.5S RNA  93.33 
 
 		 100 bp  65.9  0.000000002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.192792  n/a   
 
 
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NC_011365  Gdia_R0050  SRP RNA; RNA component of signal recognition particle  89.47 
 
 		 109 bp  65.9  0.000000002  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  1  normal  0.0253553 
 
 
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NC_009719  Plav_R0005  SRP RNA; RNA component of signal recognition particle  88.31 
 
 		 102 bp  65.9  0.000000002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
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NC_009511  Swit_R0002  SRP RNA; RNA component of signal recognition particle  95.12 
 
 		 101 bp  65.9  0.000000002  Sphingomonas wittichii RW1  Bacteria  normal  0.0332603  normal  1 
 
 
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NC_010338  Caul_R0010  SRP RNA; RNA component of signal recognition particle  91.67 
 
 		 101 bp  63.9  0.000000007  Caulobacter sp. K31  Bacteria  normal  0.767772  normal  1 
 
 
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NC_012880  Dd703_R0025  SRP RNA; RNA component of signal recognition particle  92.11 
 
 		 117 bp  52  0.00003  Dickeya dadantii Ech703  Bacteria  normal  0.829287  n/a   
 
 
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NC_008025  Dgeo_R0056  SRP RNA; RNA component of signal recognition particle  96.55 
 
 		 106 bp  50.1  0.0001  Deinococcus geothermalis DSM 11300  Bacteria  hitchhiker  0.0000625085  normal  0.583061 
 
 
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NC_007802  Jann_R0045  SRP RNA; RNA component of signal recognition particle  90.24 
 
 		 101 bp  50.1  0.0001  Jannaschia sp. CCS1  Bacteria  normal  1  normal  0.265338 
 
 
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NC_011662  Tmz1t_R0010  SRP RNA; RNA component of signal recognitionparti cle  96.55 
 
 		 106 bp  50.1  0.0001  Thauera sp. MZ1T  Bacteria  normal  0.33139  n/a   
 
 
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NC_014212  Mesil_R0019  SRP RNA; RNA component of signal recognition particle  96.55 
 
 		 107 bp  50.1  0.0001  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  0.0274413 
 
 
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NC_009439  Pmen_R0047  SRP RNA; RNA component of signal recognition particle  93.75 
 
 		 118 bp  48.1  0.0004  Pseudomonas mendocina ymp  Bacteria  normal  0.292586  normal  1 
 
 
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NC_012912  Dd1591_R0068  SRP RNA; RNA component of signal recognitionparti cle  93.55 
 
 		 117 bp  46.1  0.002  Dickeya zeae Ech1591  Bacteria  normal  0.0668362  n/a   
 
 
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NC_008740  Maqu_R0035  SRP RNA; RNA component of signal recognition particle  93.33 
 
 		 117 bp  44.1  0.007  Marinobacter aquaeolei VT8  Bacteria  normal  0.0122517  n/a   
 
 
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NC_012560  Avin_65170  bacterial signal recognition particle RNA SRP_bact  93.33 
 
 		 98 bp  44.1  0.007  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
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