39 homologs were found in PanDaTox collection
for query gene Tgr7_1793 on replicon NC_011901
Organism: Thioalkalivibrio sp. HL-EbGR7



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011901  Tgr7_1793  CRISPR-associated RAMP protein, Cmr4 family  100 
 
 		 294 aa  599  1e-170  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.486311  n/a   
 
 
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NC_013216  Dtox_2977  CRISPR-associated RAMP protein, Cmr4 family  39.93 
 
 		 273 aa  197  2.0000000000000003e-49  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  0.457954 
 
 
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NC_013526  Tter_1949  CRISPR-associated RAMP protein, Cmr4 family  39.53 
 
 		 298 aa  193  3e-48  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  1  n/a   
 
 
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NC_008553  Mthe_0647  CRISPR-associated RAMP Cmr4 family protein family protein  41.96 
 
 		 267 aa  189  5.999999999999999e-47  Methanosaeta thermophila PT  Archaea  normal  0.481851  n/a   
 
 
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NC_008148  Rxyl_0261  CRISPR-associated RAMP Cmr4 family protein family protein  40.07 
 
 		 266 aa  170  3e-41  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
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NC_010424  Daud_1820  CRISPR-associated RAMP Cmr4 family protein family protein  39.73 
 
 		 288 aa  165  8e-40  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.303143  n/a   
 
 
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NC_011899  Hore_15130  CRISPR-associated RAMP protein, Cmr4 family  31.69 
 
 		 325 aa  159  5e-38  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
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NC_010730  SYO3AOP1_0660  CRISPR-associated RAMP protein, Cmr4 family  33.09 
 
 		 258 aa  155  6e-37  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  1  n/a   
 
 
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NC_013440  Hoch_1315  CRISPR-associated RAMP protein, Cmr4 family  34.26 
 
 		 327 aa  154  2e-36  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013411  GYMC61_1196  CRISPR-associated RAMP protein, Cmr4 family  34.8 
 
 		 297 aa  153  4e-36  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_0318  CRISPR-associated RAMP protein, Cmr4 family  33.78 
 
 		 292 aa  147  2.0000000000000003e-34  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
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NC_008025  Dgeo_0962  CRISPR-associated RAMP Cmr4 family protein  39.06 
 
 		 264 aa  145  6e-34  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.60167  normal  0.960375 
 
 
-
 
NC_009972  Haur_0576  CRISPR-associated RAMP Cmr4 family protein family protein  35.71 
 
 		 278 aa  144  2e-33  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_0697  CRISPR-associated RAMP Cmr4 family protein family protein  35.41 
 
 		 293 aa  140  1.9999999999999998e-32  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_013205  Aaci_2295  CRISPR-associated RAMP protein, Cmr4 family  33.45 
 
 		 297 aa  137  3.0000000000000003e-31  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
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NC_013946  Mrub_1482  Cmr4 family CRISPR-associated RAMP protein  35.27 
 
 		 245 aa  133  3.9999999999999996e-30  Meiothermus ruber DSM 1279  Bacteria  normal  0.541255  normal  0.493855 
 
 
-
 
NC_008789  Hhal_0629  CRISPR-associated RAMP Cmr4 family protein family protein  33.23 
 
 		 304 aa  124  2e-27  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010483  TRQ2_1028  CRISPR-associated RAMP Cmr4 family protein family protein  31.29 
 
 		 292 aa  123  3e-27  Thermotoga sp. RQ2  Bacteria  normal  1  n/a   
 
 
-
 
NC_009616  Tmel_1660  CRISPR-associated RAMP Cmr4 family protein family protein  28.52 
 
 		 276 aa  123  5e-27  Thermosipho melanesiensis BI429  Bacteria  normal  1  n/a   
 
 
-
 
NC_014213  Mesil_3378  hypothetical protein  35.93 
 
 		 262 aa  119  6e-26  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
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NC_009654  Mmwyl1_2690  CRISPR-associated RAMP Cmr4 family protein family protein  32.04 
 
 		 283 aa  115  1.0000000000000001e-24  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009073  Pcal_1285  CRISPR-associated RAMP Cmr4 family protein family protein  30.67 
 
 		 306 aa  99.8  5e-20  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal  0.0121106 
 
 
-
 
NC_007333  Tfu_1580  CRISPR-associated RAMP Cmr4 family protein family protein  30.19 
 
 		 300 aa  97.1  3e-19  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_010525  Tneu_0564  CRISPR-associated RAMP Cmr4 family protein family protein  31.13 
 
 		 296 aa  94.4  2e-18  Thermoproteus neutrophilus V24Sta  Archaea  normal  0.0596645  hitchhiker  0.00107083 
 
 
-
 
NC_009954  Cmaq_1517  CRISPR-associated RAMP Cmr4 family protein family protein  28.89 
 
 		 317 aa  88.6  1e-16  Caldivirga maquilingensis IC-167  Archaea  normal  0.476222  normal  1 
 
 
-
 
NC_009376  Pars_1117  CRISPR-associated RAMP Cmr4 family protein family protein  30.29 
 
 		 308 aa  86.7  4e-16  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  0.163915  normal  1 
 
 
-
 
NC_009073  Pcal_0273  CRISPR-associated RAMP Cmr4 family protein family protein  29.35 
 
 		 300 aa  86.7  4e-16  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal  1 
 
 
-
 
NC_009634  Mevan_0108  CRISPR-associated RAMP Cmr4 family protein family protein  25.59 
 
 		 273 aa  79  0.00000000000009  Methanococcus vannielii SB  Archaea  normal  0.0120254  n/a   
 
 
-
 
NC_008698  Tpen_1320  CRISPR-associated RAMP Cmr4 family protein family protein  27.83 
 
 		 336 aa  73.2  0.000000000004  Thermofilum pendens Hrk 5  Archaea  normal  0.215019  n/a   
 
 
-
 
NC_011059  Paes_1989  CRISPR-associated RAMP protein, Cmr4 family  25.46 
 
 		 332 aa  64.3  0.000000002  Prosthecochloris aestuarii DSM 271  Bacteria  normal  1  normal  0.48391 
 
 
-
 
NC_007355  Mbar_A1356  hypothetical protein  24.79 
 
 		 321 aa  57.4  0.0000003  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.278075  normal  1 
 
 
-
 
NC_013385  Adeg_0806  CRISPR-associated RAMP protein, Cmr4 family  25 
 
 		 367 aa  53.1  0.000005  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_4240  CRISPR-associated RAMP Cmr4 family protein family protein  27.05 
 
 		 328 aa  52.8  0.000007  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.400432  normal  1 
 
 
-
 
NC_011831  Cagg_3826  CRISPR-associated RAMP protein, Cmr4 family  26.55 
 
 		 319 aa  52  0.00001  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.782464  hitchhiker  0.00621555 
 
 
-
 
NC_002950  PG1985  CRISPR-associated Cmr4 family protein  21.99 
 
 		 233 aa  52  0.00001  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.934081 
 
 
-
 
CP001800  Ssol_2351  CRISPR-associated RAMP protein, Cmr4 family  25 
 
 		 269 aa  50.1  0.00005  Sulfolobus solfataricus 98/2  Archaea  normal  1  n/a   
 
 
-
 
NC_010803  Clim_0933  CRISPR-associated RAMP protein, Cmr4 family  30.15 
 
 		 330 aa  49.3  0.00008  Chlorobium limicola DSM 245  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_2589  CRISPR-associated RAMP Cmr4 family protein family protein  24.77 
 
 		 330 aa  47.8  0.0002  Roseiflexus sp. RS-1  Bacteria  normal  0.598353  normal  0.467768 
 
 
-
 
NC_013385  Adeg_0915  CRISPR-associated RAMP protein, Cmr4 family  29.21 
 
 		 354 aa  46.6  0.0005  Ammonifex degensii KC4  Bacteria  normal  0.994799  n/a   
 
 
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