10 homologs were found in PanDaTox collection
for query gene TK90_2354 on replicon NC_013889
Organism: Thioalkalivibrio sp. K90mix



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013889  TK90_2354  membrane-flanked domain protein  100 
 
 
130 aa  265  1e-70  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_0162  hypothetical protein  44.54 
 
 
127 aa  122  1e-27  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.373951  n/a   
 
 
-
 
NC_013159  Svir_05910  predicted membrane protein  23.53 
 
 
203 aa  47  0.00008  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.697555 
 
 
-
 
NC_010001  Cphy_2852  hypothetical protein  30.12 
 
 
129 aa  45.4  0.0002  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000000356659  n/a   
 
 
-
 
NC_002950  PG1471  hypothetical protein  26.96 
 
 
155 aa  43.5  0.0009  Porphyromonas gingivalis W83  Bacteria  n/a    normal 
 
 
-
 
NC_013595  Sros_1327  hypothetical protein  23.66 
 
 
166 aa  41.2  0.004  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.266141 
 
 
-
 
NC_013170  Ccur_01220  predicted membrane protein  26.25 
 
 
700 aa  40.8  0.006  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013922  Nmag_1671  membrane-flanked domain protein  23.91 
 
 
170 aa  40.8  0.006  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_009484  Acry_0579  membrane-flanked domain-containing protein  31.33 
 
 
153 aa  40.8  0.007  Acidiphilium cryptum JF-5  Bacteria  normal  0.0224616  n/a   
 
 
-
 
NC_011071  Smal_3577  membrane-flanked domain  29.55 
 
 
512 aa  40.4  0.008  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.298166  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>