| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccur_01220 |
|---|
| Symbol | |
|---|
| ID | 8374330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptobacterium curtum DSM 15641 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013170 |
|---|
| Strand | + |
|---|
| Start bp | 153271 |
|---|
| End bp | 155373 |
|---|
| Gene Length | 2103 bp |
|---|
| Protein Length | 700 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644993046 |
|---|
| Product | predicted membrane protein |
|---|
| Protein accession | YP_003150537 |
|---|
| Protein GI | 256826578 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3428] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 146 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCAGA ATAGCCCAGG TGTTCAGCCT AACGGAATGC CGCAATCCAC TTTGACAAGC
ACGTTCACGA CCGGGCAGCG CCAGCATGTG CATGGCAGCT ACATCTGGTT AATGCCTCTG
ACGCAACTAT TCGCCATTAT CTTTGTTGCC CTTATGGCTA ACTTAGCAAG CGTTTCGGCG
TTGTTTAATA GTTTTGGCCG AAATTCCCTT GTGGCGACAT CTGCACTGAG TTTTCTGTTT
ATTGGTGGAA TTATTATCAT TCCACTTCTG ATATATGGGC TGCTCGTAGC TCTTGCCTAC
TGGGCGTATC GGAATCTGTC ATTCGTGTTT GACGAAGGAG AATTCAGCCT GTATTCAGGC
ATCATCGTAA AGAAACGCGT GCATGTACCG TATGCGCGCG TGCAATCAGT TAACCATCAT
GCTACTGTCA TCCAACGCAT TTTTGGTATT TGTACGGTTG CTATCGACAC GGCAGGTGGA
GCGGCCAATA AGGCAGTTCG TATTCCCTAT GTGTCGTTGA GCGTAGCGGA ACGTTTGCGG
TCTGAACTGT TTCTGCGCAA GGCTGTAGCA CTTGAACAGA TGGCAGGGGG GTCTGCGGCT
TCTCAGCAGG CGCCAGCTGT TCAACAGGTA CCCGTTCCCT CGGCAGCATC TGATACTTCG
GCGGCATCTG CTGTATCTGC TGCAATTTCT ACGCCGGGGG TATCCTCTGG CGCTTCTTCT
GCGGGAGCAG TGGCAACTTT AGCTGCGGAT ACTTCATCTG CTCAGGTGGC CATCCCAACG
TATGGAAGTG CTGCCATTGA TGCAAGTGGT CGTCCCGTTC CTCCAACCGA ACAAATCCGA
CAGCATACTG AAAGCGTTCA AGTGGGCAAT GGTGCTCAAG CAAGCAATGT GCTCGACGAT
ACCGTGGGCG ACATTGCCAC TTTTCGCGGT ATGTTTGGCG GTGCAATCGG CGGCTTGGAA
ACGGTCTCCT ACGAGCATGG GCTCAGCAAT GGCCAGCTGC TTATGGCAAG CCTGTCGAGC
AGTGGGATGC CGATGGTCAT CGCGATTATG TCTGTCATTG GTTTTGTCAC TGCCTTCACG
GGAGCGAGTG CTCTGCCGCT TGGTCTGTTT GCTCTTGTAG TGCTTATTGG TGGCTTAGGC
GGCATGTTGC AGGTCATTTT TTCGTATGGC GGATTCAAGG TACGTCGTCG GGGCAGCCGC
ATCGAGGTTG AACAAGGGCT GCTTCAGCGG CAGTTTTCAG GTATTGATAT TGCCCGCGTA
CAGTCGATAT CGGTCCGTCA GACCTTCTTC CGCCGTTTGA TTGGCTACTG CGAAGTATCA
CTTGGTCGTA TCGATGCACT GGAAAGTAAT CAGCAGAAGA AAGGGTCTTC GGCCAATCTT
TCACGAGGCT TGGTAGTGCA TCCATTCGTC AAGCTTAGTC AGGTAGAGAA TATTCTTGCA
GGGCTTACTC CTGAATTAAT CGACATTCCA CGCATTGATC AGCTCGTCAA GCCTCCTCGG
CGTGCCCTGC GCCGCGCACT TATTCGGCGC TGTATCTGGC GTAATGGATG GGTGCCGGCT
GCGATTGCCC TTATCGTGGC ACTAGCTTGT CTTTCAGTTC TGCGCAATTC GATTGGTATG
AACATTGCGT ATACTATTGA TTACACGATG ACTGACATGT TGTTAGAAGC AGGTGCCTCA
ACCTCTGTCA CCATGCTGAT ACTGGATCTT CTTACCAAGA TTATTGGGGC CTTCCTGGGG
CTCTGTCTTA TTCTTACTGC ATTGCAGGCA GTTGGAGCAT TCCTTTGGTA TCGACATTCA
GGGTTTGCAT GTACCAAACA CGTTGCAGCC ATTCGCAACG ATGGTCTTTC GAGTGAATTT
ACGATGATTC CGCGTGAAAA ACTCCAGTAT GCGGGAACGT GTTCGAATCC GTTTCAACGG
TTTTCTCAGG TGGCAAGCAT CGAAGCGACG ACTGCTGCGG GTGTTACGAA AACCGTGGTG
CGTCTTTGGG ATGTACGTGC AGACGATGCG CAGCGGTGGC TTGAATGGAT GCACCCTCGC
ACCGGGACAG CTTTTTCCAT TGAACAGATT ACCGCGCAGG ATGGTATCAA TCGTTCTGCC
TAG
|
|---|
| Protein sequence | MAQNSPGVQP NGMPQSTLTS TFTTGQRQHV HGSYIWLMPL TQLFAIIFVA LMANLASVSA
LFNSFGRNSL VATSALSFLF IGGIIIIPLL IYGLLVALAY WAYRNLSFVF DEGEFSLYSG
IIVKKRVHVP YARVQSVNHH ATVIQRIFGI CTVAIDTAGG AANKAVRIPY VSLSVAERLR
SELFLRKAVA LEQMAGGSAA SQQAPAVQQV PVPSAASDTS AASAVSAAIS TPGVSSGASS
AGAVATLAAD TSSAQVAIPT YGSAAIDASG RPVPPTEQIR QHTESVQVGN GAQASNVLDD
TVGDIATFRG MFGGAIGGLE TVSYEHGLSN GQLLMASLSS SGMPMVIAIM SVIGFVTAFT
GASALPLGLF ALVVLIGGLG GMLQVIFSYG GFKVRRRGSR IEVEQGLLQR QFSGIDIARV
QSISVRQTFF RRLIGYCEVS LGRIDALESN QQKKGSSANL SRGLVVHPFV KLSQVENILA
GLTPELIDIP RIDQLVKPPR RALRRALIRR CIWRNGWVPA AIALIVALAC LSVLRNSIGM
NIAYTIDYTM TDMLLEAGAS TSVTMLILDL LTKIIGAFLG LCLILTALQA VGAFLWYRHS
GFACTKHVAA IRNDGLSSEF TMIPREKLQY AGTCSNPFQR FSQVASIEAT TAAGVTKTVV
RLWDVRADDA QRWLEWMHPR TGTAFSIEQI TAQDGINRSA
|
|---|
| |