11 homologs were found in PanDaTox collection
for query gene Swit_3837 on replicon NC_009511
Organism: Sphingomonas wittichii RW1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009511  Swit_3837  putative transmembrane anti-sigma factor  100 
 
 		 233 aa  453  1.0000000000000001e-126  Sphingomonas wittichii RW1  Bacteria  normal  0.173099  normal  0.0857204 
 
 
-
 
NC_008048  Sala_2956  putative transmembrane anti-sigma factor  45.91 
 
 		 235 aa  133  1.9999999999999998e-30  Sphingopyxis alaskensis RB2256  Bacteria  hitchhiker  0.00524194  normal  0.11263 
 
 
-
 
NC_010717  PXO_00667  hypothetical protein  36.14 
 
 		 247 aa  97.8  1e-19  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_010338  Caul_4269  putative transmembrane anti-sigma factor  33.95 
 
 		 275 aa  90.5  2e-17  Caulobacter sp. K31  Bacteria  normal  1  normal  0.902774 
 
 
-
 
NC_007794  Saro_1591  putative transmembrane transcriptional regulator (anti-sigma factor)  37.38 
 
 		 229 aa  76.3  0.0000000000004  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  1  n/a   
 
 
-
 
NC_009621  Smed_5142  putative transmembrane anti-sigma factor  27.67 
 
 		 260 aa  50.8  0.00002  Sinorhizobium medicae WSM419  Bacteria  normal  0.562038  normal  1 
 
 
-
 
NC_010622  Bphy_0019  putative transmembrane anti-sigma factor  33.33 
 
 		 277 aa  47  0.0003  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.836012 
 
 
-
 
NC_010676  Bphyt_4979  putative transmembrane anti-sigma factor  35.92 
 
 		 275 aa  46.6  0.0003  Burkholderia phytofirmans PsJN  Bacteria  normal  0.291853  normal  0.0783383 
 
 
-
 
NC_007952  Bxe_B1672  transmembrane transcriptional regulator (anti-sigma factor)  35.92 
 
 		 275 aa  46.2  0.0004  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.314191 
 
 
-
 
NC_010505  Mrad2831_5261  putative transmembrane anti-sigma factor  40 
 
 		 268 aa  44.3  0.001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.127786  normal  1 
 
 
-
 
NC_012791  Vapar_2754  putative transmembrane anti-sigma factor  35 
 
 		 271 aa  42.7  0.004  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
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