| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4979 |
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| Symbol | |
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| ID | 6277695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1115779 |
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| End bp | 1116606 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642616065 |
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| Product | putative transmembrane anti-sigma factor |
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| Protein accession | YP_001888713 |
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| Protein GI | 187919682 |
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| COG category | [K] Transcription |
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| COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.291853 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.0783383 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACC AGACTATGCC GATCGGCGAA GAAGACCTGC ACGCGTACGT GGACGGCACG
CTGTCCGACG AACGCCGTGC CGATGTGGAG CGCGCGCTCG AACAGAATCC CGAGCTGGCC
GCGCGCGTCA GCGATTATTT TTCGCTGAAC AGCATGTTCC ATGAGCGCTA CGACCGCGTG
CTGAACGAGC CCGTGCCGAA GCGCCTGCAG GCGCCCGCCC CGCGCCGCTG GCGGATTGCC
GCCAACTGGC CGCAATTCGC CGGGATGGCG GCGGCACTGG TGATGGGCGT GGGCATCGGC
GTGGGCACGC ATATGGGACA GGACGTGATC GCGCCGGTCG CGGGCGGCCA CTCGGACACG
CGCCCGGTCA GCGCGGACAG TTCGGAAATG TTCGCGCGGC AGGCGGCGGT GGCGCATGTG
GTCTACATGC CCGCCGTCGA CCGGCCGACC GAACTGAGCA CCGACGACCA CGAGCAGGAT
TTCGTGCAGT GGCTCGCCAA CCGGCTCGGC ACCAACGTGC ATCCGCCGAT TCTCTCGAAG
AGCGGTTTCA ATCTCTCGGG CGGGCGTCTG CTGCCGGGCG CCGATGGGCC GACCGCGCAG
TTCATGTATC GCGGGCCGAA CGGCGAGCGG GTCACGCTGT GCATTTCGCG TCGCCAGCAG
AATTCGAACA CGACGGCGTT CAAGCTGTAT CAGGACGGCC CGGTGAACGT GTTTTACTGG
ATCGACGGCG ACTTTGGCTA TGCGGTGTCG GGAGGCATCG AGCGCAAGGA GTTGCTGCAA
CTTTCACATG ACGTGTATTC GCAGTTGACG GGCGCGGCGC CGGGTTGA
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| Protein sequence | MSDQTMPIGE EDLHAYVDGT LSDERRADVE RALEQNPELA ARVSDYFSLN SMFHERYDRV
LNEPVPKRLQ APAPRRWRIA ANWPQFAGMA AALVMGVGIG VGTHMGQDVI APVAGGHSDT
RPVSADSSEM FARQAAVAHV VYMPAVDRPT ELSTDDHEQD FVQWLANRLG TNVHPPILSK
SGFNLSGGRL LPGADGPTAQ FMYRGPNGER VTLCISRRQQ NSNTTAFKLY QDGPVNVFYW
IDGDFGYAVS GGIERKELLQ LSHDVYSQLT GAAPG
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