| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0019 |
|---|
| Symbol | |
|---|
| ID | 6241524 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | + |
|---|
| Start bp | 21120 |
|---|
| End bp | 21953 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642591781 |
|---|
| Product | putative transmembrane anti-sigma factor |
|---|
| Protein accession | YP_001856261 |
|---|
| Protein GI | 186474791 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.836012 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATC AACAGACTCC CATTAGCGAA GAGGAAATTC ATGCGTACGT GGACGGCACG
CTGTCGGACG AGCGCCGTGA GCAGGTGGAG CGTGCGATCG AACTGAATCC CGCGCTGGCC
GCGCGCATCA GCGATTACTT TTCGCTGAAC AACATGTTCC ATGAGCGCTA TGACCGCGTG
CTGAGCGAGC CCGTGCCCGT GCGCTTGCGC GTGCCGGAGA AGCGTCGCTG GATGGGCGCG
GCGAACTGGC CGCAGTTTGC GGGCATGGCG GCGGCACTCG TGCTGGGCAT CGGCATCGGC
GTCGGTACGA ACATGGGCAA GGATGTGGCT GCGCCGTGGA CGGTTGGACC GTCCGCGACG
TCCAACACGC GGCCGGTGAG CGCGGATGCA TCGGAAGTCT TCGCGCAGAA AGCGGCGTTG
GCGCATGTCG TCTATATGCC GGCCGTCGAT CGCCCGGCGC AGATCGGCGA GGACCATGAG
CAGGATTTCG TGCAGTATCT GGCGAACAAG CTCGGTACCG ACGTGCATCC GCCGATGCTC
ACGAAGAACG GCTTCGAGCT TGCTGGCGGC CGCGTGCTGC CGGGCGACGA TGGACCCGTT
GCGCAGTTCA TGTATCACAA CGCGAAGGGC GAGCGCGTGA CACTGTGCAT TTCTCATCGC
AAGGCGAGTG CGAATACTAC GGCGTTCAAG CTCTATCAGG ACGGGCCCGT GAACGTGTTC
TATTGGGTCG ATGGCGATTT CGGCTATGCG GTGTCGGGCG GCATCGATCG CAAGGTGATG
CTGCAGATTG CGCATGACGT GTATGCGCAG TTGACGGCGG CGACGCCGGG TTGA
|
|---|
| Protein sequence | MSDQQTPISE EEIHAYVDGT LSDERREQVE RAIELNPALA ARISDYFSLN NMFHERYDRV
LSEPVPVRLR VPEKRRWMGA ANWPQFAGMA AALVLGIGIG VGTNMGKDVA APWTVGPSAT
SNTRPVSADA SEVFAQKAAL AHVVYMPAVD RPAQIGEDHE QDFVQYLANK LGTDVHPPML
TKNGFELAGG RVLPGDDGPV AQFMYHNAKG ERVTLCISHR KASANTTAFK LYQDGPVNVF
YWVDGDFGYA VSGGIDRKVM LQIAHDVYAQ LTAATPG
|
|---|
| |