| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5142 |
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| Symbol | |
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| ID | 5319444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 94955 |
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| End bp | 95737 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640776920 |
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| Product | putative transmembrane anti-sigma factor |
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| Protein accession | YP_001313852 |
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| Protein GI | 150377257 |
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| COG category | [K] Transcription |
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| COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.562038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGAA CGGACTTTTC CGACGAAATA CTGATGCGCT TTGCCGATGG CGAGCTCGAC
GCCGACACGG CTGCGCAAGT CGAGCGGGCG ATGGAAACGG ATGACGAACT GGTCGCGCGG
GTGGCACTCT TCATCGAAAC ACGCCAAGCA GCCAGAACGG CCATGAAGCC GCTTCTGGAT
GAACCGCTGC CAGCCGAGCT CAAGGCTGCC GTCGAAAGCA TGGTGGCGGA GAAGACCTCC
GCACAGGCTG CGTCCGCTAC CGTGCTGCCG TTTCCGCTGC GCGCTGCCAA CGACCGCCGT
GCGAACCGCT GGCTAACACC CGTCGCCGCG TCTCTGGCCG CCGTCATTGC CGGGTTCGGC
GGATATTGGC TGCGTGGAAG TGCCGAGCCG GCGCCCGAAG GTGGCTTGCG CGTTGCAGCG
ATCGGCAGCC CGGCGCTTGG CGAGGCGCTC GCCACGGTTG CGGCAGGGGA GGAGAGGCAA
TTGCCAGGGT CCGATCAGCG TTTCCGGGCG ATTGCCACAT TCCGCGACAA CGCCCAGGCG
CTCTGCCGTG AGTTCGAGTT GGACTCGGCC GACCGCTCGA CCGTCGTCTC GGTAGCTTGC
CGAAATGGGA CCGAATGGCG GGTGACCTTT GCCGTCGTCG CCCCGGGTAG CAGTGGCGGC
TATGCCCCTG CATCTTCCAC CGAAACGCTA GATGCCTATC TGGCGGCGAT CGATGCCGGA
GCGCCCCTTG AAGCAGCGGA AGAGGCCAAG GCCCTCAAAG AGCTCCAAGG CGGGCAAGGG
TAA
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| Protein sequence | MTRTDFSDEI LMRFADGELD ADTAAQVERA METDDELVAR VALFIETRQA ARTAMKPLLD
EPLPAELKAA VESMVAEKTS AQAASATVLP FPLRAANDRR ANRWLTPVAA SLAAVIAGFG
GYWLRGSAEP APEGGLRVAA IGSPALGEAL ATVAAGEERQ LPGSDQRFRA IATFRDNAQA
LCREFELDSA DRSTVVSVAC RNGTEWRVTF AVVAPGSSGG YAPASSTETL DAYLAAIDAG
APLEAAEEAK ALKELQGGQG
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