9 homologs were found in PanDaTox collection
for query gene Strop_1834 on replicon NC_009380
Organism: Salinispora tropica CNB-440



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009380  Strop_1834  lipopolysaccharide biosynthesis protein  100 
 
 		 558 aa  1075    Salinispora tropica CNB-440  Bacteria  normal  0.0495124  normal  1 
 
 
-
 
NC_009953  Sare_1825  lipopolysaccharide biosynthesis protein  79.93 
 
 		 556 aa  733    Salinispora arenicola CNS-205  Bacteria  normal  0.028398  hitchhiker  0.00186556 
 
 
-
 
NC_013510  Tcur_1010  lipopolysaccharide biosynthesis protein  27.23 
 
 		 599 aa  63.5  0.000000009  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_008825  Mpe_A2733  chain length determinant protein  33.1 
 
 		 475 aa  54.7  0.000004  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  0.0768542 
 
 
-
 
NC_011884  Cyan7425_4938  capsular exopolysaccharide family  47.62 
 
 		 750 aa  53.1  0.00001  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  0.831467 
 
 
-
 
NC_007614  Nmul_A0243  lipopolysaccharide biosynthesis  32.74 
 
 		 463 aa  50.8  0.00007  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_0949  lipopolysaccharide biosynthesis protein  26.73 
 
 		 561 aa  48.9  0.0002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.323077  normal  1 
 
 
-
 
NC_009767  Rcas_0449  lipopolysaccharide biosynthesis protein  34.45 
 
 		 711 aa  44.7  0.005  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_8590  hypothetical protein  28.22 
 
 		 425 aa  43.9  0.008  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0593683  normal  1 
 
 
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