Gene Sros_8590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8590 
Symbol 
ID8671925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9478486 
End bp9479763 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content76% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003343975 
Protein GI271969779 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0593683 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGC CACCGGACAC CCCCGTCCGC CGCTCCGGTG GAGACCTGGC GGACTACGCG 
TCCCTCCTCC GCCGCAGATG GCCGATCCTG CTGTTCTTCC TCGCGGCCGG GATCGGCGGC
GGCGGCGCCC TGCTCCGGCT CACCCCGCCC TCCTACACCG CCACCGCCCA GGTGCTGGTC
TCCCCGACGG GCCTCTACGA ACAGACCAAC CAGGTCACCA GCCGGCAGCG CGAGCCGCTC
AACCTCGACA CCGAGGTGCA GATCGCCCAG TCCGCCGTGG TCGCCGGGAA GGTCCGGGCC
GCGCTCAAGA GCACGCCGGC ACCCGTCGAC GTCTCCGTGC CGCCCAACAC CTCGGTCCTG
GAGATCTCCT ACACCGCCGC CGACCCGCGC ACCGCGGCAG CCGGGGCCGG CGCCTACGCG
CAGGCCTATC TGGCCAACCG GGGCGAGTCC GCCACGCAGG CGCTGGACGC CCAGCTCAAG
GCGCTCCTCG CCAAGCTCAA ACAGGTCAAC GCCAGCCTGG TCACGGTGGC GGACACGCTC
CCCGGCCTGG CGAGGGGGAC GGCGGAGCGG ACCATCGCCC TGCAGCGGCA GAACGTGCTC
GGCCGCCAGA TCTACCACCT CACGGTCAGA TACGACGCGC TCAGGACCAT CCCCGTCACC
CCGGGTTCGG TGATCAGCGA GGCGGTCGCC CCGGCCGGGC CCAGCGCCCC CAGCCCACCC
CTGCATCTCG GCAGCGGTCT CATGATCGGC CTGCTCGCCG GGGTCGGCGC CGCCTGGGTC
CGCGACCGCC TCGACACCAG GATCCGCACG GGCTCCGACG TCAGGCGCCT GACCGGCCTC
GACCTCCTCA GCGCGGAGGA GGTCGGAGAG CTGACGGACG GCGCGGGGAG CGCCGTGCTG
CTGATCACCG TGCCGGGGAC GTCCTCGCGG GACGTGGCGC AGGCCGTACG CGGTCTCGAC
GAGCGCAGGA TCCCCGTGCT CGGCGCGCTC GCCGCCCCGC CGGCCGGGCC GTCGGCCGTC
TCCGGCGGCC GGCCCCCGGA GAGCCGGCGG ACCCCGGAGA GCGGACGGAC TCCGAGGGCG
GGGCGGGCCT CGAAGTCCGG CCGGGTCCCC AAGTCCGGCC GGACCCGCGC CTCCGCCCCC
GCTGACGCCT CCGCGCCCAC CTTCGCCGGC GGGACGGCCC ACGGCACCGG AGGCCGGCCC
GCGCCGGCCC CGCACCAGGC CGCCCCGCCG TCGCAGCCGC ACCCGCCCTC GGCCGACAAG
ATGGTCTTCC CGACGTGA
 
Protein sequence
MSLPPDTPVR RSGGDLADYA SLLRRRWPIL LFFLAAGIGG GGALLRLTPP SYTATAQVLV 
SPTGLYEQTN QVTSRQREPL NLDTEVQIAQ SAVVAGKVRA ALKSTPAPVD VSVPPNTSVL
EISYTAADPR TAAAGAGAYA QAYLANRGES ATQALDAQLK ALLAKLKQVN ASLVTVADTL
PGLARGTAER TIALQRQNVL GRQIYHLTVR YDALRTIPVT PGSVISEAVA PAGPSAPSPP
LHLGSGLMIG LLAGVGAAWV RDRLDTRIRT GSDVRRLTGL DLLSAEEVGE LTDGAGSAVL
LITVPGTSSR DVAQAVRGLD ERRIPVLGAL AAPPAGPSAV SGGRPPESRR TPESGRTPRA
GRASKSGRVP KSGRTRASAP ADASAPTFAG GTAHGTGGRP APAPHQAAPP SQPHPPSADK
MVFPT