| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2733 |
|---|
| Symbol | |
|---|
| ID | 4783750 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 2906730 |
|---|
| End bp | 2908157 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640091304 |
|---|
| Product | chain length determinant protein |
|---|
| Protein accession | YP_001021922 |
|---|
| Protein GI | 124267918 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
|---|
| TIGRFAM ID | [TIGR03017] chain length determinant protein EpsF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0768542 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTTCG GCCAGTTCCT TTCCATCCTC GCTGCGCGTT GGCGGCTCGT GCTGTCGATC
GTCGCGCTCG TGGTGACCGC CGCGATCGGC GTCAGCCTCG CGTTGCCGAA GCAGTACACG
GCGACCGCGG CGATCGTCTT CGACGTCAAT CCGGACCCTG TGTCGACGGT CGGCTATGGC
GAGATGGTGT GGCCCGCGTA TCTCGCGACG CAGGTCGAGA TCATGCAGAG CGTTCGGGTT
GCCAGACGCG TGGTCGAGGC GCTGCAGATG AAGGACGACG AACTCAGCCG TCGGCGCTGG
CAGGAGGCAA CGGGTGGGCA GGGCGATTTC GAGGAATGGA TGATCAATGT CCTGAGTCGA
GGACTGGTGG TCAAGCTGAC GCGTGAGTCC AACGTCGTGA CGCTGTCCTA TCGCGCCCCC
GACCCCCAGG TTGCAGCGCG GGTGTCCAAC GCGTTCGTGA AGGCCTATCT CGATACCGTG
GTCGACCTGA AGGTGGATCC AGCACGCCAG TATTCAACGT TCTTCGAGAG CCGTGCCAAA
GAGCTGCGGG GGCAGTTGGA GCAGGCACAG GCCAAGCTTT CCGCCTTCCA GCGGCAGAAG
GGGTTGATCG GGGCCGATGA ACGGCTCGAC ACTGAGTCCG CTCGGTTGGC GGAGCTCTCT
GCACAGGTGG TGGCCATGCA GGCGCTGTCG GCCGAGTCGG GCAGCCGTCA GACACAGGCT
CTGGCGCGCT CGGCGGAGCA ACTGCCTGAT GTCCAGGCCA ATCCGGTGGT CGCCAGCCTC
AAGGCCGATC TCTCTCGCCA AGAGGTCCGA CTACAGGAAT TGAACGCGCG CCTTGGCGAT
GCCCACCCGC AAGTGATGGA AGCCAAGGCA AATATCGCGG CGTTGCGCGG TCGCATCAGC
GCCGAATCGC GGCAGGTCGC TTCTGGCGTC GGCGTGACGA ACACGATCAA TCGGCAACGT
GAGGCGGAGA TTCGTGCGGC CTATGAAGCC CAGCGCCAGC GTGTGCTGCG CATGAAGGAG
CAGCGTGACG AGGCGTCGAT CTACCAGCGC GAAGTCGAAG CGGCGCAACG CGCGCTTGAC
AGCGTCATGA CGCGCTTTAA CCAGACCGCG CTCGAAAGCC AGGCGACCCG TTCCAATGCA
TCTGTTCTGA CACCGGCCAG CACGCCCTTG CTGCCCTCTT CGCCCAAGAT CTTTCTCAAT
GCGTTCATTG GGCTTTTCCT CGGAACGCTG GGTGCTGTCG CCATCGCGAT CGTTCTGGAG
ATGATCAATC GCAGGGTGCG AAACGTCGAC GACATCACCG AGGCACTCGG TCTTCCAGTG
ATCGGTACCT TGCCAAAGCC GGACCGCATT GGTGTGTTTG GCAAGCCTTC GTCTCAGCCC
ATTTTGGCGC GCCGTGTGCT GGGGCAGTTG CCGATGTCCC GGCCGTGA
|
|---|
| Protein sequence | MTFGQFLSIL AARWRLVLSI VALVVTAAIG VSLALPKQYT ATAAIVFDVN PDPVSTVGYG
EMVWPAYLAT QVEIMQSVRV ARRVVEALQM KDDELSRRRW QEATGGQGDF EEWMINVLSR
GLVVKLTRES NVVTLSYRAP DPQVAARVSN AFVKAYLDTV VDLKVDPARQ YSTFFESRAK
ELRGQLEQAQ AKLSAFQRQK GLIGADERLD TESARLAELS AQVVAMQALS AESGSRQTQA
LARSAEQLPD VQANPVVASL KADLSRQEVR LQELNARLGD AHPQVMEAKA NIAALRGRIS
AESRQVASGV GVTNTINRQR EAEIRAAYEA QRQRVLRMKE QRDEASIYQR EVEAAQRALD
SVMTRFNQTA LESQATRSNA SVLTPASTPL LPSSPKIFLN AFIGLFLGTL GAVAIAIVLE
MINRRVRNVD DITEALGLPV IGTLPKPDRI GVFGKPSSQP ILARRVLGQL PMSRP
|
|---|
| |