6 homologs were found in PanDaTox collection
for query gene Ssol_1807 on replicon CP001800
Organism: Sulfolobus solfataricus 98/2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
CP001800  Ssol_1807  RNA polymerase Rpb4  100 
 
 
113 aa  224  4e-58  Sulfolobus solfataricus 98/2  Archaea  normal  n/a   
 
 
-
 
NC_009440  Msed_0062  DNA-directed RNA polymerase, subunit F  49.09 
 
 
112 aa  128  3e-29  Metallosphaera sedula DSM 5348  Archaea  normal  0.20245  normal  0.0943991 
 
 
-
 
NC_013158  Huta_0623  RNA polymerase Rpb4  25.89 
 
 
118 aa  45.1  0.0004  Halorhabdus utahensis DSM 12940  Archaea  normal  0.570875  n/a   
 
 
-
 
NC_009954  Cmaq_1982  RNA polymerase Rpb4  28.12 
 
 
115 aa  44.7  0.0005  Caldivirga maquilingensis IC-167  Archaea  normal  0.583012  normal  0.968231 
 
 
-
 
NC_007796  Mhun_3027  RNA polymerase Rpb4  29.33 
 
 
117 aa  42  0.003  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_013926  Aboo_0764  RNA polymerase Rpb4  31.91 
 
 
104 aa  40.4  0.009  Aciduliprofundum boonei T469  Archaea  normal  n/a   
 
 
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