Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0062 |
Symbol | |
ID | 5104640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 59260 |
End bp | 59598 |
Gene Length | 339 bp |
Protein Length | 112 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640505961 |
Product | DNA-directed RNA polymerase, subunit F |
Protein accession | YP_001190163 |
Protein GI | 146302847 |
COG category | [S] Function unknown |
COG ID | [COG1460] Uncharacterized protein conserved in archaea |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.20245 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0943991 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTCTA TCCAGATCAT TGAGGAAGAT TACGTTCCCT ACTCGGTGGC CAAGGAGATT CTAAAGGAGG CCATTGAGTC AGGATCTTCC TCCTCCATTC TACAGAAGAC CTTCGAATAC CTTAACTCTC TAGAGAAGTG CAGCGCTGAA AACGCGCGGA AACTCATGGA GGAGCTTAAG GGAATGATCT CCAAGAAGGA GGTTATGGCA ATGATAAGCA GTCTTTGCCC CGACAACCCC GATGGCCTTA GGGCTATCCT CACCCTAGAG GGTAAGACGT TTTCACAGGA GGAACTTGAA AAAATTCTAG ATTTAATAAA AAGATACAGA AACAACTGA
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Protein sequence | MSSIQIIEED YVPYSVAKEI LKEAIESGSS SSILQKTFEY LNSLEKCSAE NARKLMEELK GMISKKEVMA MISSLCPDNP DGLRAILTLE GKTFSQEELE KILDLIKRYR NN
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