12 homologs were found in PanDaTox collection
for query gene Sros_1988 on replicon NC_013595
Organism: Streptosporangium roseum DSM 43021



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013595  Sros_1988  hypothetical protein  100 
 
 
599 aa  1194    Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_1369  hypothetical protein  60 
 
 
349 aa  212  2e-53  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0215137  n/a   
 
 
-
 
NC_013595  Sros_5548  hypothetical protein  57.23 
 
 
359 aa  202  9.999999999999999e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.352514  normal  0.222506 
 
 
-
 
NC_013510  Tcur_2073  CHAP domain containing protein  59.35 
 
 
344 aa  201  3e-50  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.0000221932  n/a   
 
 
-
 
NC_014165  Tbis_1754  CHAP domain-containing protein  51.63 
 
 
228 aa  148  2.0000000000000003e-34  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3310  hypothetical protein  45.81 
 
 
234 aa  132  1.0000000000000001e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.100822 
 
 
-
 
NC_013510  Tcur_3072  CHAP domain containing protein  43.31 
 
 
258 aa  130  5.0000000000000004e-29  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.0000377273  n/a   
 
 
-
 
NC_013510  Tcur_0037  Peptidoglycan-binding domain 1 protein  44.17 
 
 
332 aa  84.3  0.000000000000005  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET1070  endolysin, putative  40.5 
 
 
491 aa  67.8  0.0000000005  Dehalococcoides ethenogenes 195  Bacteria  normal  0.898366  n/a   
 
 
-
 
NC_013204  Elen_2649  CHAP domain containing protein  31.58 
 
 
279 aa  66.2  0.000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.112963 
 
 
-
 
NC_013174  Jden_1849  CHAP domain containing protein  30.83 
 
 
426 aa  56.2  0.000002  Jonesia denitrificans DSM 20603  Bacteria  normal  0.756572  normal  0.0939049 
 
 
-
 
NC_013174  Jden_1848  CHAP domain containing protein  32 
 
 
428 aa  52.4  0.00003  Jonesia denitrificans DSM 20603  Bacteria  normal  0.416568  normal  0.0942839 
 
 
-
 
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