11 homologs were found in PanDaTox collection
for query gene Shewmr7_3943 on replicon NC_008322
Organism: Shewanella sp. MR-7



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008322  Shewmr7_3943  SH3 type 3 domain-containing protein  100 
 
 		 141 aa  288  1e-77  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009665  Shew185_4293  SH3 type 3 domain-containing protein  54.48 
 
 		 135 aa  158  3e-38  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_4433  SH3 type 3 domain-containing protein  51.95 
 
 		 84 aa  92.4  2e-18  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009253  Dred_2693  N-acetylmuramoyl-L-alanine amidase  38.81 
 
 		 616 aa  49.3  0.00002  Desulfotomaculum reducens MI-1  Bacteria  normal  0.17431  n/a   
 
 
-
 
NC_011898  Ccel_2128  NLP/P60 protein  32.73 
 
 		 235 aa  47.4  0.00007  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00187925  n/a   
 
 
-
 
NC_013216  Dtox_3626  N-acetylmuramoyl-L-alanine amidase  35.29 
 
 		 476 aa  44.3  0.0006  Desulfotomaculum acetoxidans DSM 771  Bacteria  unclonable  0.0000000133632  normal  0.124331 
 
 
-
 
NC_008228  Patl_4199  SH3, type 3  36.84 
 
 		 459 aa  43.5  0.001  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.690204  n/a   
 
 
-
 
NC_008262  CPR_1245  mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain-containing protein  34.55 
 
 		 969 aa  42.7  0.002  Clostridium perfringens SM101  Bacteria  normal  0.0232944  n/a   
 
 
-
 
NC_008261  CPF_1439  mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain-containing protein  32.76 
 
 		 1049 aa  41.6  0.003  Clostridium perfringens ATCC 13124  Bacteria  unclonable  0.00896108  n/a   
 
 
-
 
NC_013411  GYMC61_3345  N-acetylmuramoyl-L-alanine amidase  28.3 
 
 		 448 aa  42  0.003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_3187  N-acetylmuramoyl-L-alanine amidase  30.91 
 
 		 474 aa  41.6  0.004  Geobacillus sp. WCH70  Bacteria  normal  0.0462523  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>