| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4199 |
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| Symbol | |
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| ID | 4175988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 5057098 |
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| End bp | 5058477 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638057235 |
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| Product | SH3, type 3 |
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| Protein accession | YP_663752 |
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| Protein GI | 109900497 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.690204 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAGATG CTGTCAGCGC CGACGTACTT AACGTGCGAA GTTTGCCGTC AACCACCAGC
GCCATCGTCG GACAGCTTAC GCGGGGTATG GTGATGGTAA CCACCCCGAT GCAGCATGGT
TGGGTGCAAT TTCGTTTCGG TGGCACATTC GGCTTTGTAT CAGGTCACTA TCTGCAAGCC
GTACGCGACT TAACCCGCCT AACGGGCACA GTAAATACAC AACTGCTAAA CATTCGCCAA
GAACCTCATG CAGGCGCAAC CGTACTAGCT AGCGTTGCCC TTGGGGCTTC AATTAAAACC
TTAGCGGTGG TGGGCGATTG GTTAGAAGTT GAGTTTAATG GGCACCAAGC CTACACGTTC
GCAAAACACG TCGATTTGGT GTACGCCGAT AACGGCTATT ACGCGAGTGT CACTGCCAGT
GCATTGAACG TGCGCAGTGC TCCGCATCAT CAAGCTAGCA TTTTTGGTCA ACTCGCTGCT
AATAGCCTCG TTTGGGTGGA AGGAGATCAG CAAACTTGGT CGCAAATACG CTTTAATGGC
AATCGCGGGT ATGTGGCCAG CACCTATTTG CAAGTCGCGC CGGTAGCTGA TGATGGCACG
CCTGCAAAAC AGAATGATCA CCAGGATCCA CATGACGAAT TACTCGATAA TGAGCTTCCT
ACTGCTGCTA CAGCCCTAGA GCCGGCAGAA CAATTAACCC CAAATCTTAT TCTCACGGTG
GCTGGTAGCA AAGAGCAACG TGCTGTGGCT GCTACCTGGA ATCGCTGGGG TGCGCTGCTA
ACAACGCTCT GTGCTGAAAA GGATATTGAT GTGGCCTGCG CGGTCGCTGT TTTGTGCGTA
GAAAGCCGAG GTAAAGGTTT TGAGCAAAAC AACAGTGACC GTTTGATTAT TCGGTTTGAG
AATCATAAAT TTTGGAAATA TTGGGGCAAG CACCACCCTC AGCAGTATCG TCAGCACTTT
TCTTATGATC CGAAAAAAGT CTGGACTAAG CATCAATGGC GAGCAAATCC GAGTGATCCA
TGGCAGAACT TTCATGGTGT GCAATCAAAA GAGTGGCAGG TATTCGAGTT TGCACGCAGT
TTAGATGAAA ATGCCGCCAT GTTATCGATC AGTATGGGTG CACCGCAAAT AATGGGCTTC
CATTATGAAC GCATAGGTTA TCAATCTGTG GTCGAGATGT TCGACGCCTT TTGCCAAGGC
ATACCCGCGC ACATACACGG CTTATTTGAG TTTTTTGACC ACATTATGCA TCAGCATTTA
CGCGACCATG CTTTCGAGAA CTTTGCAGCC TTATACAACG GGAGCGGTCA AAAAGCCTTA
TACGGCCGGC TGATAAAAAA CCACAACTAC GCATTTATAA AATTACACCC GAATGCATAA
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| Protein sequence | MLDAVSADVL NVRSLPSTTS AIVGQLTRGM VMVTTPMQHG WVQFRFGGTF GFVSGHYLQA
VRDLTRLTGT VNTQLLNIRQ EPHAGATVLA SVALGASIKT LAVVGDWLEV EFNGHQAYTF
AKHVDLVYAD NGYYASVTAS ALNVRSAPHH QASIFGQLAA NSLVWVEGDQ QTWSQIRFNG
NRGYVASTYL QVAPVADDGT PAKQNDHQDP HDELLDNELP TAATALEPAE QLTPNLILTV
AGSKEQRAVA ATWNRWGALL TTLCAEKDID VACAVAVLCV ESRGKGFEQN NSDRLIIRFE
NHKFWKYWGK HHPQQYRQHF SYDPKKVWTK HQWRANPSDP WQNFHGVQSK EWQVFEFARS
LDENAAMLSI SMGAPQIMGF HYERIGYQSV VEMFDAFCQG IPAHIHGLFE FFDHIMHQHL
RDHAFENFAA LYNGSGQKAL YGRLIKNHNY AFIKLHPNA
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