10 homologs were found in PanDaTox collection
for query gene SbBS512_E1849 on replicon NC_010658
Organism: Shigella boydii CDC 3083-94



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010658  SbBS512_E1849  hypothetical protein  100 
 
 
82 aa  167  5e-41  Shigella boydii CDC 3083-94  Bacteria  hitchhiker  0.000335703  n/a   
 
 
-
 
CP001509  ECD_01623  predicted ATP-dependent helicase  98.33 
 
 
1538 aa  124  4.0000000000000003e-28  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1987  DEAD/H associated domain protein  98.33 
 
 
1538 aa  124  4.0000000000000003e-28  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A1730  putative ATP-dependent helicase Lhr  98.33 
 
 
1525 aa  124  4.0000000000000003e-28  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_1865  putative ATP-dependent helicase Lhr  98.33 
 
 
1538 aa  124  4.0000000000000003e-28  Escherichia coli E24377A  Bacteria  normal  0.0115691  n/a   
 
 
-
 
NC_012892  B21_01613  hypothetical protein  98.33 
 
 
1538 aa  124  4.0000000000000003e-28  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_2365  putative ATP-dependent helicase Lhr  96.67 
 
 
1538 aa  121  4e-27  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.812889  normal  0.664089 
 
 
-
 
NC_010468  EcolC_1976  putative ATP-dependent helicase Lhr  96.67 
 
 
1538 aa  119  9.999999999999999e-27  Escherichia coli ATCC 8739  Bacteria  normal  0.987163  hitchhiker  0.00398653 
 
 
-
 
NC_010498  EcSMS35_1545  putative ATP-dependent helicase Lhr  96.61 
 
 
1538 aa  119  9.999999999999999e-27  Escherichia coli SMS-3-5  Bacteria  normal  0.91893  normal  0.4804 
 
 
-
 
NC_003295  RSc2599  hypothetical protein  46.81 
 
 
251 aa  44.3  0.0006  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
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