| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A1730 |
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| Symbol | lhr |
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| ID | 5593961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | + |
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| Start bp | 1751077 |
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| End bp | 1755654 |
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| Gene Length | 4578 bp |
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| Protein Length | 1525 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640920879 |
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| Product | putative ATP-dependent helicase Lhr |
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| Protein accession | YP_001458435 |
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| Protein GI | 157161117 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTTTCAC CGGCGACCCG CGACTGGTTT CTTCGCGCCT TTAAACAGCC GACCGCTGTC
CAGCCGCAAA CCTGGCATGT GGCGGCGCGA AGCGAACATG CGCTGGTGAT TGCACCGACC
GGCTCCGGGA AAACGCTGGC AGCATTTCTC TACGCCCTCG ATCGGCTCTT CCGCGAAGGC
GGCGAAGATA CCCGCGAGGC GCATAAGCGT AAAACCTCAC GCATCCTCTA TATTTCACCG
ATAAAAGCCC TGGGCACCGA CGTTCAGCGC AACTTGCAGA TCCCGTTGAA GGGTATTGCC
GATGAACGGC GGCGGCGCGG CGAAACGGAA GTCAATCTTC GCGTAGGGAT CCGTACTGGC
GATACGCCTG CACAGGAACG CAGCAAACTC ACCCGTAATC CGCCGGATAT TCTGATCACC
ACACCCGAAT CACTCTATCT GATGCTGACC TCCCGCGCGC GCGAAACGCT ACGCGGCGTC
GAAACGGTAA TTATTGATGA AGTCCACGCG GTAGCGGGCA GTAAACGTGG TGCGCATCTG
GCGTTAAGTC TGGAGCGGCT CGATGCGCTG CTCCACACCT CAGCACAGCG AATTGGCCTT
TCTGCCACTG TGCGCTCAGC CAGCGATGTG GCAGCATTTC TTGGTGGCGA TCGCCCGGTT
ACGGTAGTCA ACCCGCCCGC AATGCGCCAT CCGCAGATAC GAATTGTCGT ACCGGTCGCC
AATATGGATG ATGTCTCATC GGTCGCCAGC GGCACCGGCG AAGACAGCCA TGCCGGCCGG
GAAGGCTCCA TCTGGCCATA TATTGAAACG GGTATCCTTG ATGAAGTGTT GCGCCATCGC
TCGACCATTG TCTTTACTAA TTCACGCGGG CTGGCGGAAA AACTGACGGC ACGATTAAAT
GAGCTTTACG CCGCACGCTT ACAGCGTTCC CCGTCTATCG CCGTTGATGC GGCCCATTTC
GAGTCGACCT CCGGCGCAAC CTCTAACCGT GTACAAAGTA GCGACGTTTT TATTGCCCGC
TCACACCACG GCTCCGTCTC TAAAGAACAA CGAGCAATCA CCGAACAGGC GCTGAAATCG
GGTGAATTAC GCTGCGTGGT CGCAACCTCC AGTCTTGAAC TGGGGATTGA TATGGGCGCG
GTGGATCTGG TGATTCAGGT GGCAACGCCG CTTTCTGTTG CCAGTGGGTT ACAACGCATT
GGTCGCGCCG GACATCAGGT TGGCGGTGTA TCTAAAGGGC TGTTTTTCCC CCGTACCCGG
CGTGATTTAG TCGATTCCGC AGTCATTGTA GAGTGTATGT TCGCAGGCAG GCTGGAAAAC
CTGACACCAC CGCATAATCC TCTCGACGTC CTTGCGCAGC AAACCGTTGC CGCCGCGGCG
ATGGATGCAT TACAGGTAGA CGAATGGTAC TCCCGCGTAC GCCGTGCCGC ACCGTGGAAA
GATCTGCCAA GACGTGTTTT TGACGCCACG CTGGATATGC TTTCCGGGCG CTATCCCTCT
GGCGATTTTT CTGCTTTTCG CCCCAAACTG GTCTGGAACA GGGAGACCGG GATATTGACC
GCCCGACCTG GCGCTCAATT GTTGGCGGTT ACCAGCGGCG GCACCATTCC GGATCGTGGC
ATGTATAGCG TGTTATTACC CGAAGGTGAA GAAAAGGCCG GTTCGCGGCG GGTGGGTGAA
CTGGATGAGG AGATGGTATA TGAGTCGCGG GTGAACGACA TTATCACTCT CGGCGCTACC
TCATGGCGGA TCCAGCAAAT CACCCGCGAT CAGGTGATTG TGACTCTTGC TCCGGGTCGT
TCTGCCCGGC TCCCCTTCTG GCGTGGTGAA GGTAACGGAC GTCCGGCTGA ATTAGGCGAG
ATGATCGGCG ATTTTCTTCA TTTGCTGGCG GATGGCGCGT TCTTTTCCGG GACTATTCCC
CCGTGGCTGG CAGAAGAAAA TACGATCGCC AATATTCAGG GGTTGATTGA GGAGCAGCGC
AACGCGACGG GCATCGTTCC GGGGAGTCGC CATCTGGTCC TCGAACGGTG CCGTGATGAA
ATTGGTGACT GGCGTATTAT TTTGCACTCT CCCTATGGAA GACGGGTGCA TGAACCCTGG
GCGCTGGCGA TTGCCGGGCG AATACATGCG CTATGGGGCG CTGACGCGTC GGTGGTCGCC
AGTGATGACG GCATTGTTGC ACGTATTCCT GACACCGATG GTAAATTGCC CGATGCCGCG
ATTTTTTTGT TTGAACCAGA AAAGTTGCTG CAAATTGTCC GCAAGGCGGT AGGCAGCTCG
GCACTTTTCG CCGCCCGTTT TCGCGAATGC GCCGCGCGGG CATTATTAAT GCCGGGGCGC
ACTCCGGGCC ATCGCACCCC GCTTTGGCAA CAACGGCTGC GCGCCAGTCA GTTGCTGGAA
ATCGCTCAGG GATATCCGGA TTTTCCGGTC ATTCTCGAAA CCCTACGCGA ATGTCTGCAA
GATGTTTATG ATCTTCCCGC ACTGGAACGT TTGATGCGTC GCCTGAACGG TGGCGAAATT
CAAATATCCG ATGTAACGAC CACTACGCCC TCGCCTTTCG CCACAAGTTT ATTGTTCGGC
TATGTCGCGG AATTTATGTA CCAGAGCGAC GCCCCGCTGG CAGAGCGCCG GGCATCCGTA
CTGTCGCTGG ACAGCGAGTT ACTGCGCAAT CTACTCGGAC AGGTCGATCC GGGGGAATTA
CTCGACCCGC AGGTCATTCG CCAGGTGGAA GAAGAGTTGC AACGACTGGC TCCTGGCAGA
AGAGCGAAAG GTGAAGAAGG ATTGTTCGAC CTGCTGCGCG AACTGGGGCC AATGACCGTT
GAAGACCTGG CGCAACGGCA TACAGGCAGC AGTGAAGAGG TTGCGTCGTA TCTGGAAAAT
CTTCTTGCAG TAAAACGAAT CTTCCCAGCG ATGATTAGCG GACAGGAGCG TCTTGCCTGT
ATGGATGATG CCGCCAGGCT GCGTGATGCC CTCGGCGTAC GACTACCAGA GTCATTGCCA
GAGATTTATT TACATAGAGT CAGTTACCCG CTTCGCGACC TCTTTCTGCG CTATCTCCGG
GCTCATGCTC TGGTCACGGC TGAACAACTG GCTCATGAGT TTAGTCTCGG TATTGCCATT
GTCGAAGAGC AGCTTCAGCA ACTGCGTGAA CAGGGTCTGG TGATGAATCT GCAACAAGAC
ATCTGGGTGA GCGATGAAGT ATTTCGTCGT CTGCGTTTGC GCTCGCTGCA AGCCGCCAGA
GAAGCGACGC GTCCCGTTGC AGCCACGACC TATGCGCGAT TGCTGCTGGA ACGTCAGGGC
GTATTACCCG CCACCGATGG TAGCCCGGCG CTCTTTGCCT CAACATCGCC AGGCGTTTAT
GAGGGCGTAG ATGGCGTGAT GCGGGTGATC GAACAGCTTG CCGGAGTCGG TTTACCCGCC
TCACTCTGGG AAAGCCAGAT CCTGCCTGCC CGCGTACGCG ACTATTCGTC AGAAATGCTC
GATGAATTAC TGGCAACCGG TGCGGTTATC TGGTCGGGGC AAAAAAAACT GGGTGAAGAT
GACGGCCTGG TGGCACTGCA TCTACAGGAA TATGCTGCAG AATCGTTCAC TCCCGCCGAA
GCGGATCAGG CGAATCGTTC GGCGCTGCAA CAAGCGATAG TCGCTGTTCT GGCTGACGGA
GGAGCCTGGT TTGCACAACA AATCAGCCAA CGGATACGCG ACAAAATCGG CGAATCGGTT
GATCTCTCTG CCCTGCAAGA GGCGTTATGG GCGCTGGTCT GGCAAGGCGT CATCACCAGC
GACATTTGGG CACCGTTACG CGCCCTCACC CGCAGCAGTT CCAACGCACG CACCTCAACT
CGCCGCAGTC ACCGGGCTCG TCGTGGACGT CCTGTCTATG CGCAACCCGT CTCGCCGCGG
GTATCTTACA ACACACCAAA TCTGGCTGGA CGCTGGTCGT TATTGCAGGT GGAGCCACTA
AACGATACCG AAAGGATGCT GGCGCTGGCG GAAAATATGC TCGACCGCTA CGGCATCATC
AGTCGTCAGG CGGTGATAGC CGAAAATATC CCTGGCGGGT TTCCATCGAT GCAAACGCTT
TGTCGAAGTA TGGAAGACTC CGGGCGAATT ATGCGAGGTC GTTTTGTAGA AGGTCTGGGT
GGCGCGCAAT TCGCTGAACG TCTGACTATT GACCGATTGC GCGATCTGGC GACACAAGCC
ACGCAAACGC GCCACTATAC ACCAGTGGCG CTCTCTGCCA ACGATCCGGC TAATGTGTGG
GGAAATCTTC TGCCCTGGCC TGCACATCCG GCAACGCTGG TTCCAACGCG TCGGGCGGGT
GCGCTGGTGG TCGTTTCTGG CGGCAAATTG TTACTCTATC TGGCGCAAGG TGGCAAAAAA
ATGCTGGTCT GGCAGGAAAA AGAGGAATTA CTCGCCCCAG AGGTTTTCCA CGCGCTGACT
ACCGCACTGC GTCGCGAACC ACGGCTGCGC TTTACGCTAA CAGAAGTGAA TGATCTACCG
GTCCGGCAAA CGCCGATGTT TACGCTGCTG CGTGAAGCGG GATTTTCAAG TTCGCCACAA
GGGCTGGATT GGGGATAG
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| Protein sequence | MFSPATRDWF LRAFKQPTAV QPQTWHVAAR SEHALVIAPT GSGKTLAAFL YALDRLFREG
GEDTREAHKR KTSRILYISP IKALGTDVQR NLQIPLKGIA DERRRRGETE VNLRVGIRTG
DTPAQERSKL TRNPPDILIT TPESLYLMLT SRARETLRGV ETVIIDEVHA VAGSKRGAHL
ALSLERLDAL LHTSAQRIGL SATVRSASDV AAFLGGDRPV TVVNPPAMRH PQIRIVVPVA
NMDDVSSVAS GTGEDSHAGR EGSIWPYIET GILDEVLRHR STIVFTNSRG LAEKLTARLN
ELYAARLQRS PSIAVDAAHF ESTSGATSNR VQSSDVFIAR SHHGSVSKEQ RAITEQALKS
GELRCVVATS SLELGIDMGA VDLVIQVATP LSVASGLQRI GRAGHQVGGV SKGLFFPRTR
RDLVDSAVIV ECMFAGRLEN LTPPHNPLDV LAQQTVAAAA MDALQVDEWY SRVRRAAPWK
DLPRRVFDAT LDMLSGRYPS GDFSAFRPKL VWNRETGILT ARPGAQLLAV TSGGTIPDRG
MYSVLLPEGE EKAGSRRVGE LDEEMVYESR VNDIITLGAT SWRIQQITRD QVIVTLAPGR
SARLPFWRGE GNGRPAELGE MIGDFLHLLA DGAFFSGTIP PWLAEENTIA NIQGLIEEQR
NATGIVPGSR HLVLERCRDE IGDWRIILHS PYGRRVHEPW ALAIAGRIHA LWGADASVVA
SDDGIVARIP DTDGKLPDAA IFLFEPEKLL QIVRKAVGSS ALFAARFREC AARALLMPGR
TPGHRTPLWQ QRLRASQLLE IAQGYPDFPV ILETLRECLQ DVYDLPALER LMRRLNGGEI
QISDVTTTTP SPFATSLLFG YVAEFMYQSD APLAERRASV LSLDSELLRN LLGQVDPGEL
LDPQVIRQVE EELQRLAPGR RAKGEEGLFD LLRELGPMTV EDLAQRHTGS SEEVASYLEN
LLAVKRIFPA MISGQERLAC MDDAARLRDA LGVRLPESLP EIYLHRVSYP LRDLFLRYLR
AHALVTAEQL AHEFSLGIAI VEEQLQQLRE QGLVMNLQQD IWVSDEVFRR LRLRSLQAAR
EATRPVAATT YARLLLERQG VLPATDGSPA LFASTSPGVY EGVDGVMRVI EQLAGVGLPA
SLWESQILPA RVRDYSSEML DELLATGAVI WSGQKKLGED DGLVALHLQE YAAESFTPAE
ADQANRSALQ QAIVAVLADG GAWFAQQISQ RIRDKIGESV DLSALQEALW ALVWQGVITS
DIWAPLRALT RSSSNARTST RRSHRARRGR PVYAQPVSPR VSYNTPNLAG RWSLLQVEPL
NDTERMLALA ENMLDRYGII SRQAVIAENI PGGFPSMQTL CRSMEDSGRI MRGRFVEGLG
GAQFAERLTI DRLRDLATQA TQTRHYTPVA LSANDPANVW GNLLPWPAHP ATLVPTRRAG
ALVVVSGGKL LLYLAQGGKK MLVWQEKEEL LAPEVFHALT TALRREPRLR FTLTEVNDLP
VRQTPMFTLL REAGFSSSPQ GLDWG
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