| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1545 |
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| Symbol | lhr |
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| ID | 6144548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1529153 |
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| End bp | 1533769 |
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| Gene Length | 4617 bp |
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| Protein Length | 1538 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641616422 |
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| Product | putative ATP-dependent helicase Lhr |
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| Protein accession | YP_001743600 |
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| Protein GI | 170679759 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.91893 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.4804 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGATA ATCTAAACCC TTCATCGCCC CTGCCGGACG TGTTTTCACC GGCGACCCGC
GACTGGTTTC TTCGCGCCTT TAAACAGCCG ACCGCTGTCC AGTCGCAAAC CTGGCATGTG
GCGGCGCGAG GCGAACATGC GCTGGTGATT GCACCGACTG GCTCCGGGAA AACGCTGGCA
GCATTTCTCT ACGCCCTCGA TCAGCTCTTC CGCGAAGGCG GCGAAGATAC CCGCGAGGCG
CATAAGCGTA AAACCTCACG CATTCTCTAT ATTTCACCGA TCAAAGCTCT GGGCACCGAC
GTTCAGCGCA ACTTGCAGAT CCCGTTACAG GGTATTGCCG ATGAACGGCG GCGGCGCGGC
GAAACGGAAG TCAATCTTCG CGTGGGGATC CGTACTGGCG ATACGCCTGC ACAGGAACGC
AGCAAACTCA CCCGTAATCC GCCGGATATT CTGATCACCA CACCCGAATC ACTCTATCTG
ATGCTGACCT CCCGCGCGCG CGAAACGCTA CGCGGCGTCG AAACGGTAAT TATTGATGAA
GTCCACGCGG TAGCGGGCAG TAAACGTGGT GCGCATCTGG CGTTAAGTCT GGAGCGGCTC
GATGCGCTGC TCCACACCTC AGCACAGCGA ATTGGCCTTT CTGCCACTGT ACGCTCAGCC
AGCGATGTGG CAGCATTTCT TGGTGGCGAT CGCCCGGTTA CGGTAGTCAA CCCGCCCACA
ATGCGCCATC CGCAGATACG GATTGTCGTA CCGGTCGCCA ATATGGATGA TGTCTCATCG
GTCGCCAGCG GCACCGGCGA AGACAGCCAT GCCGGCCGAG AAGGCTCCAT CTGGCCATAT
ATTGAAACGG GTATCCTTGA TGAAGTTTTG CGCCATCGCT CGACCATTGT CTTTACTAAT
TCACGCGGGC TGGCGGAAAA ACTGACGGCA CGATTAAATG AGCTTTACGC CGCTCGCTTA
CAGCGTTCCC CGTCTATCGC CGTTGATGCG GCCCATTTCG AGTCGACCTC CGGCGCAACC
TCTAACCGTG TACAAAGTAG CGACATTTTT ATTGCCCGCT CACACCACGG CTCCGTCTCT
AAAGAACAAC GAGCAATCAC CGAACAGGCG CTGAAATCGG GTGAATTACG CTGCGTGGTC
GCAACCTCCA GTCTCGAACT GGGGATTGAT ATGGGCGCGG TGGATCTGGT GATTCAGGTG
GCAACGCCGC TTTCTGTTGC CAGTGGGTTA CAACGCATTG GACGTGCCGG ACATCAGGTT
GGCGGTGTAT CTAAAGGGCT TTTTTTCCCC CGAACCCGGC GTGACTTAGT CGATTCCGCA
GTCATTGTAG AGTGTATGTT CGCAGGCAGG CTGGAAAACC TGACACCACC GCATAATCCA
CTCGACGTCC TTGCGCAGCA AACCGTTGCC GCCGCGGCGA TGGATGCATT ACAGGTAGAC
GAATGGTACT CCCGCGTACG CCGTGCCGCA CCGTGGAAAG ATCTGCCAGG ACGTGTTTTT
GACGCCACGC TGGATATGCT TTCCGGGCGC TATCCCTCTG GCGATTTTTC TGCTTTTCGC
CCCAAACTGG TCTGGAACAG GGAGACCGGG ATATTGACCG CCCGACCTGG CGCTCAATTG
TTGGCGGTTA CCAGCGGCGG CACCATTCCG GATCGTGGCA TGTATAGCGT GTTATTACCC
GAAGGTGAAG AACAGGCCGG TTCGCGGCGG GTGGGTGAAC TGGATGAGGA GATGGTATAT
GAGTCACGGG TGAACGATAT TATCACTCTT GGCGCAACCT CATGGCGGAT CCAGCAAATC
ACCCGCGATC AGGTGATTGT GACTCCTGCT CCAGGTCGTT CTGCCCGCCT TCCCTTCTGG
CGTGGTGAAG GTAACGGACG TCCGGCAGAA TTAGGCGAGA TGATCGGCGA TTTTCTCCAT
TTACTGGCGG ATGGCGCGTT CTTTTCCGGG ACTATTCCCC CGTGGTTGGC AGAAGAAAAT
ACGATCGCCA ATATTCAGGG GTTGATTGAC GAGCAGCGCA ACGCGACGGG TATCGTTCCA
GGTAGTCGTC ATCTTGTCCT CGAACGGTGC CGTGATGAAA TTGGTGACTG GCGTATTATT
TTGCACTCTC CCTATGGAAG ACGGGTGCAT GAACCCTGGG CGCTGGCGAT TGCCGGGCGA
ATACATGCAC TATGGGGCGC TGACGCGTCT GTGGTTGCCA GTGATGACGG CATTGTTGCG
CGCATTCCTG ACACCGATGG TAAATTGCCT GATGCCGCGA TTTTTTTGTT TGAACCAGAA
AAGTTGCTGC AAATTGTCCG CGAGGCGGTA GGCAGCTCGG CACTTTTCGC CGCCCGTTTT
CGCGAATGCG CCGCGCGGGC ATTATTAATG CCGGGCCGCA CGCCGGGCCA TCGCACCCCG
CTCTGGCAAC AACGACTGCG CGCCAGTCAG TTGCTGGAAA TCGCTCAGGG ATATCCGGAT
TTTCCGGTCA TTCTCGAAAC CCTACGCGAA TGTCTGCAAG ATGTTTATGA TCTTCCCGCG
CTGGAACGTT TGATGCGTCG CCTGAACGGT GGCGAAATTC AAATATCCGA TGTGACGACC
ACTACGCCCT CGCCTTTCGC CGCCAGTTTA TTGTTCGGCT ATGTCGCGGA ATTTATGTAC
CAGAGCGACG CCCCGCTGGC AGAGCGCCGG GCATCCGTAC TGTCGCTGGA CAGCGAGTTA
CTGCGCAATC TACTCGGACA GGTCGAACCG GGGGAATTAC TCGACCCGCA GGTCATTCGC
CAGGTGGAAG AAGAGTTGCA ACGACTGGCA CCTGGCAGAA GAGCGAAAGG TGAAGAAGGA
TTGTTCGACC TGCTGCGCGA ACTGGGGCCA ATGACCGTTG AAGACCTGGC GCAACGGCAT
ACAGGCAGCA GTGAAGAGAT TGCGTCGTAT CTGGAAAATC TTCTTGCAGT AAAACGAATC
TTCCCGACGA TGATTAGCGG GCAGGAGCGT CTTGCCTGTA TGGATGATGC CGCCAGGCTG
CGCGATGCCC TCGGCGTACG ACTACCAGAG TCACTGCCAG AGATTTATTT GCACCGAGTC
AGTTACCCGC TTCGCGACCT CTTTCTGCGC TATCTCCGGG CTCATGCTCT GGTCACGGCT
GAACAACTGG CTCATGAGTT TAGTCTCGGT ATTGCCATTG TCGAAGAGCA ACTTCAGCAA
CTGCGCGAAC AGGGTCTGGT GATGAATCTG CAACAAGACA TCTGGGTGAG CGATGAAGTA
TTTCGTCGTC TGCGTTTGCG CTCGCTGCAA GCCGCCAGAG AAGCGACACG TCCCGTTGCG
GCCACGACCT ATGCGCGATT GCTGCTGGAA CGTCAGGGCG TATTACCCGC CACCGATGGT
AGCCCGGCAC TCTTTGCCTC AACATCGCCA GGCGTTTATG AGGGCGTGGA TGGCGTGATG
CGGGTGATCG AACAGCTTGC AGGAGTCGGT TTACCCGCCT CACTCTGGGA AAGCCAGATC
CTGCCTGCCC GCGTACGCGA CTATTCGCCA GAAATGCTCG ATGAATTACT GGCAACCGGA
GCGGTTATCT GGTCGGGACA AAAAAAGCTG GGTGAAGATG ACGGCCTGGT GGCACTGCAT
CTACAGGAAT ATGCCGCAGA ATCGTTCACT CCCGCCGAAG CAGATCAGGC GAATCGTTCG
GCGCTGCAGC AAGCGATAAT CGCTGTTCTG GCTGACGGAG GAGCCTGGTT TGCACAACAA
ATCAGCCAAC GGATATGCGA TAAAATCGGC GAATCGGTTG ATCCCTCGGC TCTGCAAGAG
GCGTTATGGG CGCTGGTCTG GCAAGGCGTC ATTACCAGCG ACATTTGGGC ACCGTTACGC
GCCCTCACCC GTAGCAGTTC CAACGCACGC ACCTCGACTC GCCGCAGTCA CCGGGCTCGT
CGTGGGCGTC CTGTCTATAC GCAACCCGTC TCGCCGCTGG TATCTTACAA CACACCAAAG
CTGGCCGGAC GCTGGTCGTT ATTGCAGGTG GAGCCACTAA ACGATACCGA AAGGATGCTG
GCGCTGGCGG AAAATATGCT CGACCGCTAC GGCATCATCA GTCGTCAGGC GGTGATAGCC
GAAAATATCC CTGGCGGTTT TCCATCGATG CAAACGCTTT GTCGAAGTAT GGAAGACTCC
GGGCGAATTA TGCGGGGTCG TTTTGTAGAA GGTCTGGGTG GCGCGCAATT CGCTGAACGT
CTGACTATTG ACCGATTGCG TGACCTGGCG ACACAAACCG CGCAAACGCG CCACTATACA
CCAGTGGCGC TCTCCGCCAA CGATCCGGCT AATGTGTGGG GAAATCTTCT GCCCTGGCCT
GCACATCCGG CAACGCTGGT TCCAACGCGT CGGGCGGGTG CGCTGGTGGT CGTTTCTGGC
GGCAAATTGT TACTTTATCT GGCGCAAGGT GGCAAAAAAA TGCTGGTCTG GCAGGAAAAA
GAGGAATTAC TCGCCCCAGA GGTTTTCCAC GCGCTGACTA CCGCACTGCG TCGCGAACCA
CGGCGGCGCT TTACGCTGAC AGAAGTGAAT GATCTACCAG TCCGACAAAC GCCGATGTTT
ACGCTGCTGC GTGAGGCGGG ATTTTCAAGT TCGCCACAAG GGCTGGATTG GGAATAG
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| Protein sequence | MADNLNPSSP LPDVFSPATR DWFLRAFKQP TAVQSQTWHV AARGEHALVI APTGSGKTLA
AFLYALDQLF REGGEDTREA HKRKTSRILY ISPIKALGTD VQRNLQIPLQ GIADERRRRG
ETEVNLRVGI RTGDTPAQER SKLTRNPPDI LITTPESLYL MLTSRARETL RGVETVIIDE
VHAVAGSKRG AHLALSLERL DALLHTSAQR IGLSATVRSA SDVAAFLGGD RPVTVVNPPT
MRHPQIRIVV PVANMDDVSS VASGTGEDSH AGREGSIWPY IETGILDEVL RHRSTIVFTN
SRGLAEKLTA RLNELYAARL QRSPSIAVDA AHFESTSGAT SNRVQSSDIF IARSHHGSVS
KEQRAITEQA LKSGELRCVV ATSSLELGID MGAVDLVIQV ATPLSVASGL QRIGRAGHQV
GGVSKGLFFP RTRRDLVDSA VIVECMFAGR LENLTPPHNP LDVLAQQTVA AAAMDALQVD
EWYSRVRRAA PWKDLPGRVF DATLDMLSGR YPSGDFSAFR PKLVWNRETG ILTARPGAQL
LAVTSGGTIP DRGMYSVLLP EGEEQAGSRR VGELDEEMVY ESRVNDIITL GATSWRIQQI
TRDQVIVTPA PGRSARLPFW RGEGNGRPAE LGEMIGDFLH LLADGAFFSG TIPPWLAEEN
TIANIQGLID EQRNATGIVP GSRHLVLERC RDEIGDWRII LHSPYGRRVH EPWALAIAGR
IHALWGADAS VVASDDGIVA RIPDTDGKLP DAAIFLFEPE KLLQIVREAV GSSALFAARF
RECAARALLM PGRTPGHRTP LWQQRLRASQ LLEIAQGYPD FPVILETLRE CLQDVYDLPA
LERLMRRLNG GEIQISDVTT TTPSPFAASL LFGYVAEFMY QSDAPLAERR ASVLSLDSEL
LRNLLGQVEP GELLDPQVIR QVEEELQRLA PGRRAKGEEG LFDLLRELGP MTVEDLAQRH
TGSSEEIASY LENLLAVKRI FPTMISGQER LACMDDAARL RDALGVRLPE SLPEIYLHRV
SYPLRDLFLR YLRAHALVTA EQLAHEFSLG IAIVEEQLQQ LREQGLVMNL QQDIWVSDEV
FRRLRLRSLQ AAREATRPVA ATTYARLLLE RQGVLPATDG SPALFASTSP GVYEGVDGVM
RVIEQLAGVG LPASLWESQI LPARVRDYSP EMLDELLATG AVIWSGQKKL GEDDGLVALH
LQEYAAESFT PAEADQANRS ALQQAIIAVL ADGGAWFAQQ ISQRICDKIG ESVDPSALQE
ALWALVWQGV ITSDIWAPLR ALTRSSSNAR TSTRRSHRAR RGRPVYTQPV SPLVSYNTPK
LAGRWSLLQV EPLNDTERML ALAENMLDRY GIISRQAVIA ENIPGGFPSM QTLCRSMEDS
GRIMRGRFVE GLGGAQFAER LTIDRLRDLA TQTAQTRHYT PVALSANDPA NVWGNLLPWP
AHPATLVPTR RAGALVVVSG GKLLLYLAQG GKKMLVWQEK EELLAPEVFH ALTTALRREP
RRRFTLTEVN DLPVRQTPMF TLLREAGFSS SPQGLDWE
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