| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_2365 |
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| Symbol | lhr |
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| ID | 6967289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 2235108 |
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| End bp | 2239724 |
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| Gene Length | 4617 bp |
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| Protein Length | 1538 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643386238 |
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| Product | putative ATP-dependent helicase Lhr |
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| Protein accession | YP_002270722 |
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| Protein GI | 209398820 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.812889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.664089 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGATA ATCCAAACCC TTCATCGCCC CTGCCGGACG TGTTTTCACC GGCGACCCGC
GACTGGTTTC TTCGCGCCTT TAAACAGCCG ACCGCTGTCC AGTCGCAAAC CTGGCATGTG
GCGGCGCGAG GCGAACATGC GCTGGTGATT GCACCGACTG GCTCCGGGAA AACGCTGGCA
GCATTTCTCT ACGCCCTCGA TCGACTCTTC CGCGAAGGCG GCGAAGATAC CCGCGAGGCG
CATAAACGTA AAACCTCACG CATCCTCTAT ATTTCACCGA TAAAAGCCCT GGGCACCGAC
GTTCAGCGCA ACTTGCAGAT CCCGTTGAAG GGTATTGCCG ATGAACGGCG GCGGCGCGGC
GAAACGGAAG TCAATCTTCG CGTGGGGATC CGTACTGGCG ATACGCCTGC ACAGGAACGC
AGCAAACTCA CCCGTAATCC GCCGGATATT CTGATCACCA CACCCGAATC ACTCTATCTG
ATGCTGACCT CCCGCGCGCG CGAAACGCTA CGCGGCGTCG AAACGGTAAT TATTGATGAA
GTCCACGCGG TAGCGGGAAG TAAACGTGGT GCGCATCTGG CGTTAAGTCT GGAGCGGCTC
GATGCGCTGC TCCACACCTC AGCACAGCGA ATTGGCCTTT CTGCCACTGT GCGCTCAGCC
AGCGATGTGG CAGCATTTCT TGGTGGCGAT CGCCCGGTTA CGGTAGTCAA CCCGCCCGCA
ATGCGTCATC CGCAGATACG GATTGTCGTA CCAGTCGCCA ATATGGATGA TGTCTCATCG
GTCGCCAGCG GCACTGGCGA AGACAGCCAT GCCGGCCGGG AAGGCTCCAT CTGGCCATAT
ATTGAAACGG GTATCCTTGA TGAAGTGTTG CGCCATCGCT CGACCATTGT CTTTACTAAT
TCGCGGGGGC TGGCGGAAAA ACTGACGGCA CGATTAAATG AGCTTTACGC CGCACGCTTA
CAGCGTTCCC CGTCTATCGC CGCTGATGCG GCCCATTTCG AGTCGACCTC TGGCGCAACC
TCTAACCGTG TACAAAGTAG CGACGTTTTT ATTGCCCGCT CACACCACGG CTCCGTCTCT
AAAGAACAAC GAGCAATCAC CGAGCAGGCG CTGAAATCGG GTGAGTTACG CTGCGTGGTC
GCAACTTCCA GTCTCGAACT GGGGATTGAT ATGGGCGCTG TGGAGCTGGT GATTCAGGTG
GCAACGCCGC TTTCTGTTGC CAGTGGGTTA CAACGCATTG GACGTGCCGG ACACCAGATA
GGAGGTATCT CCAAAGGGCT TTTTTTCCCC CGAACCAGGC GTGACTTAGT CGATTCCGCA
GTCATTGTAG AGTGTATGTT CGCAGGCAGG CTGGAAAACC TGACACCTCC GCATAATCCA
CTCGACGTCC TTGCGCAGCA CACCGTTGCC GCCGCGGCGA TGGATGCATT ACAGGTAGAC
GAATGGTACT CCCGCGTACG CCGTGCCGCA CCGTGGAAAG ATCTGCCAAG ACGTGTTTTT
GACGCCACGC TGGATATGCT TTCCGGACGC TATCCCTCTG GCGATTTTTC TGCTTTTCGC
CCCAAACTGG TCTGGAACAG GGAGACCGGG ATATTGACCG CCCGACCTGG CGCTCAGCTG
TTGGCGGTTA CCAGCGGCGG CACCATTCCG GATCGTGGCA TGTATAGCGT GTTATTACCC
GAAGGGGAAG AACAGGCCGG TTCGCGACGG GTGGGTGAAC TGGATGAGGA GATGGTATAT
GAGTCGCGGG TGAACGATAT TATCACTCTC GGCGCAACCT CATGGCGGAT CCAGCAAATC
ACCCGCGATC AGGTGATTGT GACTCCTGCT CCGGGTCGTT CTGCCCGGCT CCCCTTCTGG
CGTGGTGAAG GTAACGGACG TCCGGCTGAA TTAGGCGAGA TGATCGGCGA TTTTCTTCAT
TTGCTGGCGG ATGGAGCGTT CTTTTCCGGG ACTATTCCCC CGTGGCTGGC TGAAGAAAAT
ACGATCGCCA ATATTCAGGG GTTGATTGAC GAGCAGCGCA ACGCGACGGG TATTGTTCCG
GGGAGTCGTC ATCTGGTCCT CGAACGGTGC CGTGATGAAA TTGGCGATTG GCGTATTATT
TTGCACTCTC CCTATGGAAG ACGGGTGCAT GAACCCTGGG CGCTGGCGAT TGCCGGGCGA
ATACATGCGC TTTGGGGCGC TGACGCGTCT GTGGTCGCCA GTGATGACGG CATTGTTGCG
CGCATTCCTG ACACTGATGG TAAATTGCCC GACGCCGCGA TTTTTTTGTT TGAACCAGAA
AAGTTGCTGC AAATTGTCCG CGAGGCGGTA GGCAGTTCGG CACTTTTCGC CGCCCGTTTT
CGCGAATGCG CCGCGCGGGC ATTATTAATG CCGGGCCGCA CGCCGGGCCA TCGCACCCCG
CTTTGGCAAC AACGGCTGCG CGCCAGTCAG TTGCTGGAAA TCGCTCAGGG ATATCCGGAT
TTTCCGGCCA TTCTCGAAAC CCTACGCGAA TGTCTGCAAG ATGTTTATGA TCTTCCCGCA
CTGGAACGTT TGATGCGTCG CCTGAACGGA GGCGAAATTC AAATATCCGA TGTAACGACT
ACTACGCCCT CGCCTTTCGC CACAAGTTTA TTGTTCGGCT ATGTCGCGGA ATTTATGTAC
CAGAGCGACG CCCCGCTGGC AGAACGCCGG GCATCCGTAC TGTCGCTGGA CAGCGAGTTA
CTGCGCAATC TACTCGGACA GGTCGATCCG GGGGAATTAC TCGACCCGCA GGTCATTCGC
CAGGTGGAAG AAGAGTTGCA ACGACTGGCT CCTGGCAGAA GAGCGAAAGG TGAAGAAGGA
TTGTTCGACC TGCTGCGCGA ACTGGGGCCA ATGACCGTTG AAGACCTGGC GCAACGGCAT
ACAGGCAGCA GTGAAGAGAT TGCCTCGTAT CTGGAAAATC TTCTTACAGT AAAACGCATC
TTCCCGACGA TGATTAGTGG ACAGGAGCGT CTTGCCTGTA TGGATGATGC CGCCAGGCTG
CGCGATGCCC TCGGCGTACG ATTACCAGAG TCACTGCCAG AGATTTATTT GCATAGAGTC
AGTTACCCGC TTCGCGACCT CTTTCTACGC TATCTCCGGG CTCATGCTCT GGTCACGGCT
GAACAACTGG CTCATGAGTT TAGTCTCGGT ATTGCCATTG TCGAAGAGCA GCTTCAGCAA
CTGCGCGAAC AGGGTCTGGT GATGAATCTG CAACAAGACA TCTGGGTGAG CGATGAAGTA
TTTCGTCGTC TGCGTTTGCG CTCGCTGCAA GCCGCCAGAG AAGCGACGCG TCCCGTTGCA
GCCACGACCT ATGCGCGATT GCTGCTGGAA CGTCAGGGCG TATTACCCGC CACCGATGGT
AGCCCGGCGC TCTTTGCCTC AACATCGCCA GGCGTTTATG AGGGGGTGGA TGGCGTGATG
CGGGTGATCG AACAGCTTGC CGGAGTCGGC TTACCCGCCT CACTCTGGGA AAGCCAGATC
TTGCCTGCCC GCGTACACGA CTATTCGCCA GAAGTGCTCG ATGAATTACT GGCAACCGGT
GCGGTTATCT GGTCGGGGCA AAAAAAACTG GGTGAAGATG ACGGCCTGGT GGCACTGCAT
CTACAGGAAT ATGCTGCAGA ATCGTTCACT CCCGCCGAAG CGGATCAGGC GAATCGTTCG
GCGCTGCAAC AAGCGATAGT CGCTGTTCTG GCTGACGGAG GAGCCTGGTT TGCACAACAA
ATCAGCCAAC GGATACGCGA CAAAATCGGC GAATCGGTTG ATCCCTCGGC ACTGCAAGAG
GCGTTATGGG CGCTGGTCTG GCAAGGCGTC ATCACCAGCG ATATTTGGGC ACCGTTACGC
GCCCTCACCC GCAGCAGTTC CAACGCACGC ACCTCAACTC GCCGCAGTCA CCGGGCTCGT
CGTGGGCGTC CTGTCTATGC ACAACCCGTC TCGCCGCGGG TATCTTACAA CACACCAAAT
CTGGCTGGAC GCTGGTCGTT ATTGCAGGTG GAGCCACTAA ACGATACCGA AAGGATGCTG
GCGCTGGCGG AAAATATGCT CGACCGCTAC GGCATCATCA GTCGTCAGGC GGTGATAGCC
GAAAATATCC CTGGCGGGTT TCCATCGATG CAAACGCTTT GTCGAAGTAT GGAAGATTCC
GGGCGAATTA TGCGAGGTCG TTTTGTAGAA GGTCTGGGTG GCGCGCAATT CGCTGAACGT
CTGACTATTG ACCGCTTGCG CGACCTGGCG ACACAAGCCG CGCAAACGCG CCACTATACA
CCAGTGGCGC TCTCCGCCAA CGATCCGGCT AATGTGTGGG GAAATCTTCT GCCCTGGCCT
GCACATCCGG CAACGCTGGT ACCAACGCGT CGGGCGGGTG CGCTGGTGGT CGTTTCTGGC
GGCAAATTGT TACTCTATCT GGCGCAAGGT GGCAAAAAAA TGCTGGTCTG GCAGGAAAAA
GAGGAATTAC TCGCCCCAGA GGTTTTCCAC GCGCTGACTA CCGCACTGCG TCGCGAACCA
CGGCTGCGCT TTACGCTAAC AGAAGTGAAT GATCTACCGG TCTGGCAAAC GCCGATGTTT
ACGCTGCTGC GTGAAGCGGG ATTTTCAAGT TCGCCACAAG GGCTGGATTG GGGATAG
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| Protein sequence | MADNPNPSSP LPDVFSPATR DWFLRAFKQP TAVQSQTWHV AARGEHALVI APTGSGKTLA
AFLYALDRLF REGGEDTREA HKRKTSRILY ISPIKALGTD VQRNLQIPLK GIADERRRRG
ETEVNLRVGI RTGDTPAQER SKLTRNPPDI LITTPESLYL MLTSRARETL RGVETVIIDE
VHAVAGSKRG AHLALSLERL DALLHTSAQR IGLSATVRSA SDVAAFLGGD RPVTVVNPPA
MRHPQIRIVV PVANMDDVSS VASGTGEDSH AGREGSIWPY IETGILDEVL RHRSTIVFTN
SRGLAEKLTA RLNELYAARL QRSPSIAADA AHFESTSGAT SNRVQSSDVF IARSHHGSVS
KEQRAITEQA LKSGELRCVV ATSSLELGID MGAVELVIQV ATPLSVASGL QRIGRAGHQI
GGISKGLFFP RTRRDLVDSA VIVECMFAGR LENLTPPHNP LDVLAQHTVA AAAMDALQVD
EWYSRVRRAA PWKDLPRRVF DATLDMLSGR YPSGDFSAFR PKLVWNRETG ILTARPGAQL
LAVTSGGTIP DRGMYSVLLP EGEEQAGSRR VGELDEEMVY ESRVNDIITL GATSWRIQQI
TRDQVIVTPA PGRSARLPFW RGEGNGRPAE LGEMIGDFLH LLADGAFFSG TIPPWLAEEN
TIANIQGLID EQRNATGIVP GSRHLVLERC RDEIGDWRII LHSPYGRRVH EPWALAIAGR
IHALWGADAS VVASDDGIVA RIPDTDGKLP DAAIFLFEPE KLLQIVREAV GSSALFAARF
RECAARALLM PGRTPGHRTP LWQQRLRASQ LLEIAQGYPD FPAILETLRE CLQDVYDLPA
LERLMRRLNG GEIQISDVTT TTPSPFATSL LFGYVAEFMY QSDAPLAERR ASVLSLDSEL
LRNLLGQVDP GELLDPQVIR QVEEELQRLA PGRRAKGEEG LFDLLRELGP MTVEDLAQRH
TGSSEEIASY LENLLTVKRI FPTMISGQER LACMDDAARL RDALGVRLPE SLPEIYLHRV
SYPLRDLFLR YLRAHALVTA EQLAHEFSLG IAIVEEQLQQ LREQGLVMNL QQDIWVSDEV
FRRLRLRSLQ AAREATRPVA ATTYARLLLE RQGVLPATDG SPALFASTSP GVYEGVDGVM
RVIEQLAGVG LPASLWESQI LPARVHDYSP EVLDELLATG AVIWSGQKKL GEDDGLVALH
LQEYAAESFT PAEADQANRS ALQQAIVAVL ADGGAWFAQQ ISQRIRDKIG ESVDPSALQE
ALWALVWQGV ITSDIWAPLR ALTRSSSNAR TSTRRSHRAR RGRPVYAQPV SPRVSYNTPN
LAGRWSLLQV EPLNDTERML ALAENMLDRY GIISRQAVIA ENIPGGFPSM QTLCRSMEDS
GRIMRGRFVE GLGGAQFAER LTIDRLRDLA TQAAQTRHYT PVALSANDPA NVWGNLLPWP
AHPATLVPTR RAGALVVVSG GKLLLYLAQG GKKMLVWQEK EELLAPEVFH ALTTALRREP
RLRFTLTEVN DLPVWQTPMF TLLREAGFSS SPQGLDWG
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