16 homologs were found in PanDaTox collection
for query gene SERP0338 on replicon NC_002976
Organism: Staphylococcus epidermidis RP62A



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002976  SERP0338  hypothetical protein  100 
 
 
154 aa  320  3e-87  Staphylococcus epidermidis RP62A  Bacteria  normal  0.3398  n/a   
 
 
-
 
NC_009674  Bcer98_2133  transcription activator effector binding  33.33 
 
 
152 aa  78.6  0.00000000000003  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.774789  n/a   
 
 
-
 
NC_003909  BCE_2764  hypothetical protein  30.1 
 
 
166 aa  47.4  0.00008  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.000234477  n/a   
 
 
-
 
NC_010002  Daci_3099  AraC family transcriptional regulator  21.02 
 
 
326 aa  47  0.00009  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B2547  transcriptional regulator, AraC family  30.39 
 
 
156 aa  47  0.00009  Bacillus cereus G9842  Bacteria  normal  0.0684742  hitchhiker  0.0000000036137 
 
 
-
 
NC_008751  Dvul_2703  transcription activator, effector binding  23.53 
 
 
326 aa  47  0.0001  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.268178 
 
 
-
 
NC_011725  BCB4264_A2745  transcriptional regulator, AraC family  29.52 
 
 
158 aa  45.8  0.0002  Bacillus cereus B4264  Bacteria  normal  0.611146  n/a   
 
 
-
 
NC_011769  DvMF_1576  transcriptional regulator, AraC family  25.42 
 
 
436 aa  44.7  0.0005  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_005957  BT9727_2502  hypothetical protein  28.04 
 
 
159 aa  42.7  0.002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.000000000359333  n/a   
 
 
-
 
NC_009436  Ent638_2577  DNA gyrase inhibitor  20.13 
 
 
157 aa  42.7  0.002  Enterobacter sp. 638  Bacteria  normal  normal  0.0670847 
 
 
-
 
NC_010571  Oter_0771  AraC family transcriptional regulator  22.93 
 
 
288 aa  42  0.003  Opitutus terrae PB90-1  Bacteria  normal  normal  0.472166 
 
 
-
 
NC_011658  BCAH187_A2788  hypothetical protein  26.17 
 
 
166 aa  42.4  0.003  Bacillus cereus AH187  Bacteria  decreased coverage  0.0000000178794  n/a   
 
 
-
 
NC_006274  BCZK2467  hypothetical protein  26.17 
 
 
159 aa  41.2  0.005  Bacillus cereus E33L  Bacteria  normal  0.0149967  n/a   
 
 
-
 
NC_005945  BAS2546  hypothetical protein  26.47 
 
 
159 aa  40.8  0.007  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.000652694  n/a   
 
 
-
 
NC_007530  GBAA_2733  hypothetical protein  26.47 
 
 
159 aa  40.8  0.007  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.000951736  n/a   
 
 
-
 
NC_011773  BCAH820_2741  hypothetical protein  26.47 
 
 
159 aa  40.8  0.007  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.19844e-25 
 
 
-
 
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