52 homologs were found in PanDaTox collection
for query gene Rxyl_1796 on replicon NC_008148
Organism: Rubrobacter xylanophilus DSM 9941



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008148  Rxyl_1796  multiple resistance and pH regulation protein F  100 
 
 
88 aa  166  7e-41  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.673053  n/a   
 
 
-
 
NC_008148  Rxyl_3143  membrane bound protein complex subunit mbxB  62.5 
 
 
88 aa  87  9e-17  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_007955  Mbur_0137  putative monovalent cation/H+ antiporter subunit F  29.55 
 
 
88 aa  62.8  0.000000002  Methanococcoides burtonii DSM 6242  Archaea  normal  0.911502  n/a   
 
 
-
 
NC_009952  Dshi_0733  multiple resistance and pH regulation protein F  40.54 
 
 
118 aa  54.7  0.0000004  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.130974  normal 
 
 
-
 
NC_009523  RoseRS_2097  multiple resistance and pH regulation protein F  30.23 
 
 
87 aa  52.4  0.000002  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_007520  Tcr_0059  putative monovalent cation/H+ antiporter subunit F  39.51 
 
 
89 aa  52  0.000002  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_1207  multiple resistance and pH regulation protein F  45.12 
 
 
89 aa  51.2  0.000005  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.0179618 
 
 
-
 
NC_008609  Ppro_3223  putative monovalent cation/H+ antiporter subunit F  40 
 
 
91 aa  50.4  0.000008  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_04213  putative monovalent cation/H+ antiporter subunit F  48.21 
 
 
94 aa  48.5  0.00003  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_010803  Clim_0982  multiple resistance and pH regulation protein F  36.51 
 
 
90 aa  48.1  0.00004  Chlorobium limicola DSM 245  Bacteria  normal  0.739743  n/a   
 
 
-
 
NC_009456  VC0395_1125  putative monovalent cation/H+ antiporter subunit F  34.18 
 
 
103 aa  47.8  0.00005  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000095206  n/a   
 
 
-
 
NC_003910  CPS_3814  putative monovalent cation/H+ antiporter subunit F  34.57 
 
 
89 aa  46.6  0.0001  Colwellia psychrerythraea 34H  Bacteria  normal  0.345278  n/a   
 
 
-
 
NC_009439  Pmen_1445  multiple resistance and pH regulation protein F  32.56 
 
 
89 aa  46.6  0.0001  Pseudomonas mendocina ymp  Bacteria  normal  0.0244113  normal 
 
 
-
 
NC_007947  Mfla_0578  putative monovalent cation/H+ antiporter subunit F  34.57 
 
 
89 aa  46.2  0.0001  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00573992  decreased coverage  0.00947424 
 
 
-
 
NC_008044  TM1040_1542  putative monovalent cation/H+ antiporter subunit F  32.1 
 
 
89 aa  45.8  0.0002  Ruegeria sp. TM1040  Bacteria  normal  normal  0.0184419 
 
 
-
 
NC_013159  Svir_30390  Multiple resistance and pH regulation protein F (MrpF / PhaF)  39.77 
 
 
92 aa  45.4  0.0002  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.289206 
 
 
-
 
NC_007802  Jann_3719  multiple resistance and pH regulation protein F  32.1 
 
 
89 aa  45.8  0.0002  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_013926  Aboo_0665  multiple resistance and pH regulation protein F  37.04 
 
 
85 aa  45.4  0.0003  Aciduliprofundum boonei T469  Archaea  normal  n/a   
 
 
-
 
NC_009718  Fnod_1747  multiple resistance and pH regulation protein F  37.74 
 
 
95 aa  44.7  0.0005  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_0079  multiple resistance and pH regulation protein F  30.99 
 
 
91 aa  44.3  0.0006  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_1104  multiple resistance and pH regulation protein F  29.63 
 
 
89 aa  44.3  0.0006  Thauera sp. MZ1T  Bacteria  normal  0.0102977  n/a   
 
 
-
 
NC_009767  Rcas_1773  multiple resistance and pH regulation protein F  32.14 
 
 
87 aa  43.9  0.0008  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_3733  putative monovalent cation/H+ antiporter subunit F  42.86 
 
 
94 aa  43.9  0.0008  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_008942  Mlab_0949  putative monovalent cation/H+ antiporter subunit F  37.1 
 
 
86 aa  43.1  0.001  Methanocorpusculum labreanum Z  Archaea  normal  0.0187747  normal  0.214865 
 
 
-
 
NC_007802  Jann_3690  multiple resistance and pH regulation protein F  38.6 
 
 
107 aa  43.5  0.001  Jannaschia sp. CCS1  Bacteria  normal  normal  0.973299 
 
 
-
 
NC_009956  Dshi_3809  multiple resistance and pH regulation protein F  42.11 
 
 
89 aa  43.1  0.001  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.332403 
 
 
-
 
NC_007404  Tbd_0493  multisubunit Na+/H+ antiporter, subunit F  41.38 
 
 
89 aa  43.1  0.001  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3986  putative monovalent cation/H+ antiporter subunit F  32.1 
 
 
89 aa  43.5  0.001  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU2339  putative monovalent cation/H+ antiporter subunit F  40.35 
 
 
91 aa  43.1  0.001  Geobacter sulfurreducens PCA  Bacteria  normal  0.962701  n/a   
 
 
-
 
NC_013422  Hneap_1126  multiple resistance and pH regulation protein F  41.07 
 
 
102 aa  43.5  0.001  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00913548  n/a   
 
 
-
 
NC_013946  Mrub_0865  multiple resistance and pH regulation protein F  39.66 
 
 
88 aa  42.7  0.002  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.717084 
 
 
-
 
NC_011059  Paes_0099  multiple resistance and pH regulation protein F  31.43 
 
 
90 aa  42.7  0.002  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_2441  multiple resistance and pH regulation protein F  38.03 
 
 
94 aa  42.7  0.002  Thauera sp. MZ1T  Bacteria  normal  0.770309  n/a   
 
 
-
 
NC_012560  Avin_19570  sodium hydrogen antiporter subunitF, ShaF  36.25 
 
 
89 aa  42.7  0.002  Azotobacter vinelandii DJ  Bacteria  normal  0.256992  n/a   
 
 
-
 
NC_013926  Aboo_0385  multiple resistance and pH regulation protein F  43.48 
 
 
88 aa  42.7  0.002  Aciduliprofundum boonei T469  Archaea  normal  0.0828098  n/a   
 
 
-
 
NC_010003  Pmob_0896  multiple resistance and pH regulation protein F  34.48 
 
 
65 aa  42.7  0.002  Petrotoga mobilis SJ95  Bacteria  normal  0.297824  n/a   
 
 
-
 
NC_007493  RSP_0996  pH adaption potassium efflux system, PhaF subunit  32.88 
 
 
89 aa  42.4  0.002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0786377  n/a   
 
 
-
 
NC_008709  Ping_1354  monovalent cation/proton antiporter, pH regulation subunit F  37.93 
 
 
89 aa  42.4  0.002  Psychromonas ingrahamii 37  Bacteria  normal  0.258998  normal 
 
 
-
 
NC_008740  Maqu_2853  multiple resistance and pH regulation protein F  30.26 
 
 
89 aa  42.7  0.002  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_2656  multiple resistance and pH regulation protein F  32.88 
 
 
89 aa  42.4  0.002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_0228  multiple resistance and pH regulation protein F  32.88 
 
 
89 aa  42.4  0.002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0106096  normal 
 
 
-
 
NC_009616  Tmel_1211  putative monovalent cation/H+ antiporter subunit F  32.43 
 
 
85 aa  41.2  0.004  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013158  Huta_0565  multiple resistance and pH regulation protein F  31.25 
 
 
96 aa  41.6  0.004  Halorhabdus utahensis DSM 12940  Archaea  normal  0.4041  n/a   
 
 
-
 
NC_008463  PA14_50690  putative monovalent cation/H+ antiporter subunit F  42.11 
 
 
85 aa  41.6  0.004  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.00854292 
 
 
-
 
NC_011988  Avi_5264  PH Adaption potassium efflux system  30.77 
 
 
93 aa  41.2  0.005  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_0701  multiple resistance and pH regulation protein F  28 
 
 
89 aa  41.2  0.005  Paracoccus denitrificans PD1222  Bacteria  normal  0.390785  normal 
 
 
-
 
NC_008576  Mmc1_2215  multiple resistance and pH regulation protein F  30.49 
 
 
86 aa  40.8  0.006  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.0688335 
 
 
-
 
NC_009656  PSPA7_4320  putative monovalent cation/H+ antiporter subunit F  41.38 
 
 
89 aa  40.4  0.007  Pseudomonas aeruginosa PA7  Bacteria  normal  0.409592  n/a   
 
 
-
 
NC_013510  Tcur_4626  multiple resistance and pH regulation protein F  37.1 
 
 
88 aa  40.4  0.007  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A1682  putative monovalent cation/H+ antiporter subunit F  32.1 
 
 
90 aa  40.8  0.007  Ralstonia eutropha JMP134  Bacteria  normal  0.145705  n/a   
 
 
-
 
NC_010483  TRQ2_1612  putative monovalent cation/H+ antiporter subunit F  34.92 
 
 
82 aa  40.4  0.008  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.000561435  n/a   
 
 
-
 
NC_007964  Nham_1006  putative monovalent cation/H+ antiporter subunit F  38.33 
 
 
92 aa  40  0.01  Nitrobacter hamburgensis X14  Bacteria  normal  0.762364  n/a   
 
 
-
 
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