13 homologs were found in PanDaTox collection
for query gene Rru_A1648 on replicon NC_007643
Organism: Rhodospirillum rubrum ATCC 11170



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007643  Rru_A1648  helix-turn-helix protein, CopG  100 
 
 		 114 aa  220  6e-57  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.519385  n/a   
 
 
-
 
NC_009467  Acry_3271  hypothetical protein  62.69 
 
 		 99 aa  82.4  0.000000000000002  Acidiphilium cryptum JF-5  Bacteria  normal  0.737845  n/a   
 
 
-
 
NC_009668  Oant_3137  hypothetical protein  73.21 
 
 		 99 aa  81.6  0.000000000000003  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_009720  Xaut_0819  hypothetical protein  73.21 
 
 		 99 aa  81.3  0.000000000000004  Xanthobacter autotrophicus Py2  Bacteria  normal  0.104173  normal  1 
 
 
-
 
NC_011368  Rleg2_5374  Protein of unknown function DUF1778  54.9 
 
 		 94 aa  52.4  0.000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0668573  normal  0.988789 
 
 
-
 
NC_012560  Avin_39810  hypothetical protein  48 
 
 		 97 aa  43.5  0.001  Azotobacter vinelandii DJ  Bacteria  normal  0.443766  n/a   
 
 
-
 
NC_012917  PC1_0122  hypothetical protein  45.45 
 
 		 92 aa  42.4  0.002  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008781  Pnap_1572  hypothetical protein  45.1 
 
 		 94 aa  41.6  0.003  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.271539  normal  1 
 
 
-
 
NC_011149  SeAg_B3866  hypothetical protein  46.67 
 
 		 88 aa  41.6  0.004  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  1  n/a   
 
 
-
 
NC_010660  SbBS512_A0301  hypothetical protein  36.36 
 
 		 100 aa  40.8  0.007  Shigella boydii CDC 3083-94  Bacteria  hitchhiker  0.00707252  n/a   
 
 
-
 
NC_011083  SeHA_C3975  hypothetical protein  44.44 
 
 		 88 aa  40.8  0.007  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011094  SeSA_A3847  putative cytoplasmic protein  44.44 
 
 		 88 aa  40.8  0.007  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011205  SeD_A4035  hypothetical protein  44.44 
 
 		 88 aa  40.8  0.007  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.64384  normal  0.367724 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>