Gene Rru_A1648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1648 
Symbol 
ID3835067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp1940050 
End bp1940394 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content66% 
IMG OID637825742 
Producthelix-turn-helix protein, CopG 
Protein accessionYP_426735 
Protein GI83592983 
COG category[S] Function unknown 
COG ID[COG4453] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.519385 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGCAC CAGCCAACCG CAAGGATCAT CCTCTCTCCA TGCGTCTGCC CGATGCCGAT 
CTCGCCTTGA TCGACCGGGC CGCCACTCTG CGTGGTCGAT CGCGGACGGA TTTCGTGCGC
GAGGCGGCGG TGCGGGCCGC CGAAGAGGTG GTGGATGGGT GCGGTCTTGA TCCGCATGTC
GGAAGGGGGC TTGGCCGACT TCAAAGCGGC GCTATCGGCA CCCGCCGCGT CCGTTCCGGG
GATGGTCGAG ATTCTAAGCC GATCGGCCCT TTGGGAAGGC GGGGACGACC GGACCTGATG
GACCATGTCG CTCTCGTCGC CAGAACCCTT GAATGCCGCC CATGA
 
Protein sequence
MPAPANRKDH PLSMRLPDAD LALIDRAATL RGRSRTDFVR EAAVRAAEEV VDGCGLDPHV 
GRGLGRLQSG AIGTRRVRSG DGRDSKPIGP LGRRGRPDLM DHVALVARTL ECRP