15 homologs were found in PanDaTox collection
for query gene PputW619_0832 on replicon NC_010501
Organism: Pseudomonas putida W619



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010501  PputW619_0832  relaxase/mobilization nuclease family protein  100 
 
 		 455 aa  944    Pseudomonas putida W619  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013735  Slin_7038  Relaxase/mobilization nuclease family protein  25.14 
 
 		 490 aa  60.5  0.00000006  Spirosoma linguale DSM 74  Bacteria  normal  1  n/a   
 
 
-
 
NC_007973  Rmet_2834  hypothetical protein  27.27 
 
 		 441 aa  56.6  0.0000009  Cupriavidus metallidurans CH34  Bacteria  normal  0.705285  normal  1 
 
 
-
 
NC_013037  Dfer_5167  Relaxase/mobilization nuclease family protein  23.32 
 
 		 307 aa  55.5  0.000002  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  0.955908 
 
 
-
 
NC_004578  PSPTO_1093  relaxase/mobilization nuclease domain protein  37.5 
 
 		 805 aa  51.2  0.00003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.246621  n/a   
 
 
-
 
NC_011729  PCC7424_2475  Relaxase/mobilization nuclease family protein  23.23 
 
 		 392 aa  50.1  0.00009  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0661835 
 
 
-
 
NC_013734  Slin_7019  Relaxase/mobilization nuclease family protein  24.36 
 
 		 294 aa  49.7  0.0001  Spirosoma linguale DSM 74  Bacteria  normal  0.170359  n/a   
 
 
-
 
NC_011729  PCC7424_3874  Relaxase/mobilization nuclease family protein  23.23 
 
 		 392 aa  48.1  0.0003  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.991649 
 
 
-
 
NC_007615  Nmul_B2797  relaxase/mobilization nuclease domain-containing protein  25 
 
 		 398 aa  46.2  0.001  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.276128  n/a   
 
 
-
 
NC_004311  BRA0373  traI protein, putative  40.98 
 
 		 650 aa  45.4  0.002  Brucella suis 1330  Bacteria  normal  1  n/a   
 
 
-
 
NC_007105  pE33L54_0050  relaxase  25.48 
 
 		 443 aa  45.1  0.003  Bacillus cereus E33L  Bacteria  normal  0.699797  n/a   
 
 
-
 
NC_009957  Dshi_3989  relaxase/mobilization nuclease family protein  24.26 
 
 		 777 aa  43.9  0.006  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  n/a   
 
 
-
 
NC_010000  Sbal195_4671  conjugal transfer relaxase TraI  21.69 
 
 		 713 aa  43.9  0.006  Shewanella baltica OS195  Bacteria  n/a    n/a   
 
 
-
 
NC_011081  SeHA_A0074  putative relaxase/mobilization nuclease domain protein  23.84 
 
 		 899 aa  43.9  0.006  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  1  normal  0.0174778 
 
 
-
 
NC_008042  TM1040_3793  relaxase/mobilization nuclease domain-containing protein  33.87 
 
 		 736 aa  43.5  0.008  Ruegeria sp. TM1040  Bacteria  decreased coverage  0.00267002  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>