10 homologs were found in PanDaTox collection
for query gene Pmen_3333 on replicon NC_009439
Organism: Pseudomonas mendocina ymp



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009439  Pmen_3333  Sel1 domain-containing protein  100 
 
 		 103 aa  203  8e-52  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.00000000200888  normal  1 
 
 
-
 
NC_002947  PP_1692  Sel1 domain protein repeat-containing protein  75.29 
 
 		 141 aa  128  2.0000000000000002e-29  Pseudomonas putida KT2440  Bacteria  hitchhiker  0.000440954  normal  0.56597 
 
 
-
 
NC_009512  Pput_4027  Sel1 domain-containing protein  75.29 
 
 		 139 aa  128  2.0000000000000002e-29  Pseudomonas putida F1  Bacteria  hitchhiker  0.0000000000522378  normal  1 
 
 
-
 
NC_010501  PputW619_1248  hypothetical protein  77.78 
 
 		 96 aa  126  9.000000000000001e-29  Pseudomonas putida W619  Bacteria  hitchhiker  0.00000895679  normal  0.131526 
 
 
-
 
NC_010322  PputGB1_1290  Sel1 domain-containing protein  75 
 
 		 139 aa  126  1.0000000000000001e-28  Pseudomonas putida GB-1  Bacteria  hitchhiker  0.0000000000000341988  normal  0.607736 
 
 
-
 
NC_007492  Pfl01_1658  hypothetical protein  64.58 
 
 		 107 aa  116  9.999999999999999e-26  Pseudomonas fluorescens Pf0-1  Bacteria  unclonable  0.00000000000000957137  decreased coverage  0.00112349 
 
 
-
 
NC_012560  Avin_35250  hypothetical protein  74.36 
 
 		 117 aa  112  2.0000000000000002e-24  Azotobacter vinelandii DJ  Bacteria  hitchhiker  0.0000000141879  n/a   
 
 
-
 
NC_007963  Csal_3044  Sel1-like protein  30.95 
 
 		 169 aa  42  0.003  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_011369  Rleg2_3268  Sel1 domain protein repeat-containing protein  38.71 
 
 		 360 aa  40.8  0.007  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  0.561586 
 
 
-
 
NC_012850  Rleg_3567  Sel1 domain protein repeat-containing protein  37.7 
 
 		 360 aa  40.8  0.007  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.0755433 
 
 
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