Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1290 |
Symbol | |
ID | 5869050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1436885 |
End bp | 1437304 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641546389 |
Product | Sel1 domain-containing protein |
Protein accession | YP_001667533 |
Protein GI | 167032302 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000000000341988 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.607736 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTCC GCGGTAAACA CCTCGCCAGC CCCGCTGCAT CGACACCTGC GCCTCCCGCC AAACGCTTTT CCCTGAAAGT GGCCTTGTGG CTGCTCGACA GCCCGCGCCT GGGCGACAAG CCCCAGGTCA AGCATCTGGC CGGGCGCCTG TTGAAGCAGC CAGCGCGCCA GGGCGTGGTG GTGGCGCAAA GCCGCTTGGG GCAGATGCTG TGCCGCGATT GTGGCAACGC CCGCGACCGG CGCATTGGCC ATGAGCTGCT GCGCCAGGCC GCCCGTGCAG GGGATCGGCG GGCGCAATTG GAGTACGCGC GGCAGTGCCA GCATAACGAG CCTGAGCAGG CGCGCTATTG GCTGGAGCTT GCGGCAGGGC AGGGGTCGCA GGAAGCGCGG CGGCTGTTGC GGCAGTGGTT TCCTGGCTGA
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Protein sequence | MKFRGKHLAS PAASTPAPPA KRFSLKVALW LLDSPRLGDK PQVKHLAGRL LKQPARQGVV VAQSRLGQML CRDCGNARDR RIGHELLRQA ARAGDRRAQL EYARQCQHNE PEQARYWLEL AAGQGSQEAR RLLRQWFPG
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