18 homologs were found in PanDaTox collection
for query gene Plim_4263 on replicon NC_014149
Organism: Planctomyces limnophilus DSM 3776



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014149  Plim_4263  phage tape measure protein  100 
 
 
574 aa  1149    Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_0287  hypothetical protein  31.14 
 
 
565 aa  98.2  4e-19  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.00035869  normal 
 
 
-
 
NC_010320  Teth514_1263  phage tape measure protein  24.47 
 
 
852 aa  94.7  4e-18  Thermoanaerobacter sp. X514  Bacteria  decreased coverage  0.00378287  n/a   
 
 
-
 
NC_011830  Dhaf_4807  phage tape measure protein  30.89 
 
 
694 aa  79.7  0.0000000000001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011779  BbuZS7_G10  tape measure domain protein  28.11 
 
 
1087 aa  71.6  0.00000000004  Borrelia burgdorferi ZS7  Bacteria  decreased coverage  0.00000554511  n/a   
 
 
-
 
NC_007494  RSP_3355  putative tape measure protein  26.48 
 
 
775 aa  63.5  0.000000009  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_2103  phage tape measure protein  28.72 
 
 
1307 aa  61.6  0.00000003  Shewanella baltica OS185  Bacteria  normal  0.56214  n/a   
 
 
-
 
NC_010655  Amuc_1348  phage tape measure protein  30.34 
 
 
706 aa  60.5  0.00000008  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  0.0450902  hitchhiker  0.000000275861 
 
 
-
 
NC_009997  Sbal195_2149  phage tape measure protein  28.52 
 
 
1308 aa  58.2  0.0000004  Shewanella baltica OS195  Bacteria  normal  0.843593  normal 
 
 
-
 
NC_013162  Coch_0644  hypothetical protein  26.19 
 
 
537 aa  58.2  0.0000004  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.0395132  n/a   
 
 
-
 
NC_004347  SO_0680  hypothetical protein  27.07 
 
 
1308 aa  55.1  0.000004  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009457  VC0395_A1388  hypothetical protein  26.63 
 
 
346 aa  54.7  0.000005  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_2697  hypothetical protein  26.24 
 
 
553 aa  50.1  0.0001  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_014212  Mesil_1924  hypothetical protein  26.38 
 
 
693 aa  49.3  0.0002  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_2320  phage tape measure protein  27.33 
 
 
792 aa  48.5  0.0003  Jonesia denitrificans DSM 20603  Bacteria  normal  0.722724  normal 
 
 
-
 
NC_013517  Sterm_2826  hypothetical protein  26.22 
 
 
893 aa  44.7  0.005  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0765  phage tail tape measure protein, TP901 family  27.44 
 
 
1306 aa  43.9  0.007  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0789  phage tape measure protein  26.83 
 
 
1306 aa  43.5  0.01  Shewanella baltica OS223  Bacteria  normal  normal  0.204936 
 
 
-
 
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