Gene Coch_0644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0644 
Symbol 
ID8367061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp799416 
End bp801029 
Gene Length1614 bp 
Protein Length537 aa 
Translation table11 
GC content43% 
IMG OID644983071 
Producthypothetical protein 
Protein accessionYP_003140763 
Protein GI256819484 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0395132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAAA ATCCAAAAAA CACGATATCT TCTTTCTTTG ATCAGACTAA AAGGTTAAAG 
GAGGTGGTTA ATAACATTAT AGACCCTATC TCGTCTTTAC AGAAAATATT TAAGCAAGGT
TTTACGGCAG ACACCCAAAA GATGAGTCTG GCTACTTTTG TGCAAGGTAA TATGCAAAAG
GCACAAGAAA TACATCAGAA TCTCACACAA TACAGTGGGC AAACGGCTTA TGAAGTACCA
TCGCTTGTGA AGGCTCAAGA GAGTTTGATG GGAGCAGGCT TGCTTCCTGA AGGAGCATTA
GGAATGCTCA AACAAATAGG AGATATTGCC TTGGGGGATA GCAAAAAGAT AGAAACCTTG
GCTACTGCCT TTGCCAAAGT GACCACACAA GGGAAGTTGC AAGAAGCTAT ACTCACACAG
ATGCAACAGG CAGGATTTAA TCCTTTGCAA GTGATAAGTG AGCGTACGGG CGAGACTATG
AGCTCTCTGC AAGAGCGAAT GGACAAAGGA AGAATTTCGG CAAGAGAGTT GGCTGAGGCT
TTCCGATGGG CAACCGACGC ACAAGGAGAT TTTTATCAAG GAGCTGAGAA TGTGAACAGC
ACTCTACAAG GCAGGTTTGC AGTTTTAATG GCTTCGATAC AATCTATAGC TGTAAAAGTA
TATGAGGTTA TAAGTCCGTT GCTGATTCCG TTGGTAGCAC TTTCTACGAT GGTATTTGGA
GCTTTGAATG ACGGATTGAG TTGGTTTATC CAAAAGCTTC AAGAGGGTAA CCCCATAATC
CTTGGTATTG CAGGAGTGTT AGGAGTATTT ATTACAGCTA TTACATTGCA TAACACTTAT
ATGGCTATTG CTGCGGCGTG GCAGAACCGA CTATCGTGGG CAGTAATTAA AACGAACCTA
GCTTTTTTAG CTAATCCTAT TGTATTGATT ATAGCAGGTA TTGTGGCTCT TATTGCTATC
ATCACTTATT GTATTGTAGG CGTGAGCGGT TGGGGCAAAG CGTGGGATAA CACTGTGCAA
GGAATGAAAT ACTTGTGGGA AGCTTTTATT CTCACCTACA AAGCCCATTG GAATACGGCG
GTCAATGCTT TTATGGCAGG TATAGACCTC TGTAAGTTGG CTTGGTATAA GTTTAAAGAG
GCTGTAGGTT TGGGGGATAG TAAAGAGAAC CAAGCGATGA TAAGCCAAAT ACAAAACGAC
TTGCAAGAAC GTGCCAAATC GGTAGCAGAA GGCTATAAGA AAGCAGGTGA GGCAGGAGCT
AAAGCAAAAG AATATTTTGG TAAAGCGTGG AACTCTTTGG AGTTTAAGAG CCTTTCGAGT
GTGAAAGACG GGCTAATGGG CAAGTTAGGC ATAGGGCAAA CGGGACAAAA AACAAGTCCG
TTAGCAACAC CTATTGCCAG CACACCTTTT TCAGAGATGG GTAATAAAAC CAAAGATAAT
ATCGTAACGG GAGGTACCCG TCAAACGCAT ATCAACATAC AGATAGGCAA CTTGGGCACG
GATACCAAAG TGTACGTATC ATCGGTACGG GAAGGGGTGG AAAACTTTGG GGCGCAACTG
AAAGAAGAGC TTTTGAGAAT TGTGAACAGT GTAAACCAAA TGCAAACAGT GTAA
 
Protein sequence
MAENPKNTIS SFFDQTKRLK EVVNNIIDPI SSLQKIFKQG FTADTQKMSL ATFVQGNMQK 
AQEIHQNLTQ YSGQTAYEVP SLVKAQESLM GAGLLPEGAL GMLKQIGDIA LGDSKKIETL
ATAFAKVTTQ GKLQEAILTQ MQQAGFNPLQ VISERTGETM SSLQERMDKG RISARELAEA
FRWATDAQGD FYQGAENVNS TLQGRFAVLM ASIQSIAVKV YEVISPLLIP LVALSTMVFG
ALNDGLSWFI QKLQEGNPII LGIAGVLGVF ITAITLHNTY MAIAAAWQNR LSWAVIKTNL
AFLANPIVLI IAGIVALIAI ITYCIVGVSG WGKAWDNTVQ GMKYLWEAFI LTYKAHWNTA
VNAFMAGIDL CKLAWYKFKE AVGLGDSKEN QAMISQIQND LQERAKSVAE GYKKAGEAGA
KAKEYFGKAW NSLEFKSLSS VKDGLMGKLG IGQTGQKTSP LATPIASTPF SEMGNKTKDN
IVTGGTRQTH INIQIGNLGT DTKVYVSSVR EGVENFGAQL KEELLRIVNS VNQMQTV