10 homologs were found in PanDaTox collection
for query gene Patl_0309 on replicon NC_008228
Organism: Pseudoalteromonas atlantica T6c



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008228  Patl_0309  hypothetical protein  100 
 
 
86 aa  176  1e-43  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.699115  n/a   
 
 
-
 
NC_009654  Mmwyl1_1903  NADPH-dependent FMN reductase  66.28 
 
 
219 aa  129  2.0000000000000002e-29  Marinomonas sp. MWYL1  Bacteria  normal  0.348571  normal  0.573134 
 
 
-
 
NC_008340  Mlg_2714  NADPH-dependent FMN reductase  56.98 
 
 
223 aa  106  1e-22  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_009783  VIBHAR_00942  hypothetical protein  43.75 
 
 
197 aa  65.1  0.0000000003  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_004454  putative reductase  47.06 
 
 
188 aa  57  0.00000008  Vibrio sp. Ex25  Bacteria  normal  0.418649  n/a   
 
 
-
 
NC_012791  Vapar_1339  NADPH-dependent FMN reductase  36.9 
 
 
196 aa  46.2  0.0002  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_2517  NADPH-dependent FMN reductase  36.9 
 
 
196 aa  43.5  0.001  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.313233  normal  0.323569 
 
 
-
 
NC_009921  Franean1_1578  NADPH-dependent FMN reductase  38.1 
 
 
192 aa  41.6  0.004  Frankia sp. EAN1pec  Bacteria  normal  0.642215  normal  0.0176124 
 
 
-
 
NC_008048  Sala_0509  NADPH-dependent FMN reductase  36.14 
 
 
196 aa  40.8  0.006  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.0312157  normal  0.613586 
 
 
-
 
NC_010511  M446_1363  NADPH-dependent FMN reductase  36.9 
 
 
306 aa  40.8  0.006  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0633447 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>