Gene Franean1_1578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1578 
Symbol 
ID5669981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1885033 
End bp1885611 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content67% 
IMG OID641240497 
ProductNADPH-dependent FMN reductase 
Protein accessionYP_001505923 
Protein GI158313415 
COG category[R] General function prediction only 
COG ID[COG0431] Predicted flavoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.642215 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0176124 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCA AGATCGGCAT CATCATCGGC AGCACCCGTC CGAACCGCAA CGGCGAGCAG 
GTGGCCAAGT GGGTGTTCGA CGTCGCCTCG AAGCGCACCG ACGCCGAGTT CGAGCTCGTC
GATCTGCTGG ACTACCCGCT GCCGCACCTC GACGAGCCGC TCCCGCCGTC GCTGGGCCAG
TACCAGAACG AGCACACCAA GCGCTGGGCC GCCAAGATCG CATCTTTTGA CGGGTTCGTG
ATGGTGACGC CCGAGTACAA CCACAGCACC TCGGGCGTGC TGAAGAACGC CATCGACTAC
CTGTTCAGCG AGTGGGCGAA CAAGGCGGTC GGCTTCGTCT CCTACGGCGG GGCCGGCGGC
GCCCGCGCCG CGGAGCACCT GCGTCTCATC GTCGGCGAGC TGCAGATGGC CGACGTCCGC
CAGCAGGTCG TCCTGTCGCT GCTCACCGAG TTCGAGAACT TCAGCGTGTT CAAGCCCGGC
GAGTACAACC TGGCCGCGCT CGGCACGATG CTCGACCAGG TCGTCGCCTG GAGCACCGCC
CTTGCACCGC TGCGGCAGCC CGCCGCCTCA GAGGCCTGA
 
Protein sequence
MTIKIGIIIG STRPNRNGEQ VAKWVFDVAS KRTDAEFELV DLLDYPLPHL DEPLPPSLGQ 
YQNEHTKRWA AKIASFDGFV MVTPEYNHST SGVLKNAIDY LFSEWANKAV GFVSYGGAGG
ARAAEHLRLI VGELQMADVR QQVVLSLLTE FENFSVFKPG EYNLAALGTM LDQVVAWSTA
LAPLRQPAAS EA