7 homologs were found in PanDaTox collection
for query gene Noca_2278 on replicon NC_008699
Organism: Nocardioides sp. JS614



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008699  Noca_2278  sigma-70 region 4 domain-containing protein  100 
 
 		 473 aa  952    Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_1410  sigma-70 region 4 domain-containing protein  43.66 
 
 		 428 aa  337  1.9999999999999998e-91  Catenulispora acidiphila DSM 44928  Bacteria  decreased coverage  0.000424388  normal  0.0278593 
 
 
-
 
NC_009636  Smed_3111  RNA polymerase factor sigma-32  45.88 
 
 		 288 aa  57  0.0000008  Sinorhizobium medicae WSM419  Bacteria  normal  0.58748  normal  1 
 
 
-
 
NC_014165  Tbis_3033  hypothetical protein  25.64 
 
 		 621 aa  50.1  0.0001  Thermobispora bispora DSM 43833  Bacteria  normal  0.627155  normal  0.211412 
 
 
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NC_013595  Sros_8441  hypothetical protein  27.46 
 
 		 615 aa  45.8  0.002  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009802  CCC13826_2186  RNA polymerase sigma factor RpoD  39.68 
 
 		 617 aa  43.9  0.006  Campylobacter concisus 13826  Bacteria  decreased coverage  0.00338141  n/a   
 
 
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NC_009952  Dshi_2978  RNA polymerase factor sigma-32  39.39 
 
 		 293 aa  43.5  0.009  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  1 
 
 
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