| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2978 |
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| Symbol | rpoH2 |
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| ID | 5710829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3145214 |
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| End bp | 3146095 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641268904 |
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| Product | RNA polymerase factor sigma-32 |
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| Protein accession | YP_001534312 |
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| Protein GI | 159045518 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGCTAG ACGGATATTC AGGTGAAATG AGTTTGTCCC GGCGTGCGAT GCAGGCCGAA
TTGCTCGACG CGGAAACGGA GCTGAGGCTG GCCTATGCCT GGCGCGATCA GCGGGACGAA
GAGGCGCTGC ACCGCCTCAT CACCGCGTAT ATGCGCCTTG CGATCTCGAT GGCGGCGAAA
TTCAAGCGCT ACGGCGCCCC GATGAACGAC CTGATCCAGG AAGCGGGTCT GGGCCTCATG
AAGGCCGCTG ACAAGTTCGA CCCGGATCGC GGTGTGCGGT TCTCGACCTA TGCGGTGTGG
TGGATCAAGG CGTCGATCCA GGATTATGTG ATGCGGAACT GGTCGATGGT GCGGACGGGG
TCCACCTCGT CCCAGAAGTC GCTGTTCTTC AATATGCGCC GGGTTCAGGC CCGTCTGGAG
CGCGAAGCGG CCTCGGCGGG CGAGCCCCTC GACCGGCACC AGCTGCGCCA GATGATTGCC
ACCGAGGTCG GTGTGCCTCT GCATGACGTC GAGATGATGG AAGGACGCCT CGCGGGCTCC
GACTATTCCC TGAACGCCAC CCAGTCGACC GAGGACGAGG GCCGCGAATG GATCGACACG
CTGGAAGACA CCGGCGCGCA AGCCGCCGAA CTGGTCGAGC AGGATCATGA TATCGAGACC
CTGCGCGGCT GGCTGATCAC GGCGATGGAC GCGCTGAACG AGCGGGAACG CTTCATCGTG
CGCGAGCGCA AGCTGCGCGA CCAGCCGCGG ACATTGGAAA GCCTCGGCCA AGAGTTGGGC
CTGTCTAAAG AGCGTGTGCG GCAGCTCGAA GCGGCCGCCT TCGGCAAGAT GCGCAAGAAC
CTGATGAACC AGTCTTCCGA GGTTCGCCAA TTCTTCGCCT GA
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| Protein sequence | MALDGYSGEM SLSRRAMQAE LLDAETELRL AYAWRDQRDE EALHRLITAY MRLAISMAAK
FKRYGAPMND LIQEAGLGLM KAADKFDPDR GVRFSTYAVW WIKASIQDYV MRNWSMVRTG
STSSQKSLFF NMRRVQARLE REAASAGEPL DRHQLRQMIA TEVGVPLHDV EMMEGRLAGS
DYSLNATQST EDEGREWIDT LEDTGAQAAE LVEQDHDIET LRGWLITAMD ALNERERFIV
RERKLRDQPR TLESLGQELG LSKERVRQLE AAAFGKMRKN LMNQSSEVRQ FFA
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