| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1410 |
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| Symbol | |
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| ID | 8332749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 1603255 |
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| End bp | 1604541 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644954558 |
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| Product | sigma-70 region 4 domain-containing protein |
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| Protein accession | YP_003112174 |
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| Protein GI | 256390610 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000424388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0278593 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCTAT GGAAGAGTCT CTCGCCACGG GACCAAGCCT TGCACTCGCG TCGGGCCTCT
GGCGAGACTC TGGATTCGAT TGGACAGTCC TATGGGCTTT CGCGCGAGCG AATCCGCCAG
CTGATCAGCC GCGGCGAGAA GTCTTGGGTC GACCAGGTCG ACGCGCTTCG ACCAGGGTGG
CGTGCGAGCG TTAGACAGAG GTTCGCGGTG AGGCCTGTCG TCGCCGAATC CGACTTCGCC
GATATTCTTC CGGACTCGGT CGGCATCGTA CGGGGGACGC TACTCCGCGC TGCGGGCGCT
GACCGCGCCC GGACGTGGGC TGGACCTATC GATGGGATTT GGTCGATGGA CCCAAGTGGT
CTCGCCGCAC AACTACGTGA CTTGATCGCG TTGGCTCCGT TCACAGACGA CGACTTGGAC
ACCGCCGCGG CGAATCTCGA GTTTCCAGAG AACACTCCGT TGCGAGCCAT CCTCACCCAT
TCGCGCAGCC CTCTGGTGCG GGGCCCTCAC GATTACTGGC TGCGACGTAA CGCTAGAGCG
CGAGACGCCA GCTACCTCTG GCTGCTTTCT GAGGGCGAGC CGCGGAGAAT CGAACCAATC
GTGATGGCTG TCGGGGGTAA CCGCAACGCT GTCGCCGAGG CGATGCGTCG TGACAGCCGT
TTCCGGCAAT TGCGCCCCGA GGGCACGTGG GCCCTAACGG ACTGGCACGT TCCAGGCGCG
ACCGAATACA CGAACGCGAT GGATGTCGTT GTCGACGTAC TCACAGAGCG AGGACCGATC
ACACGGAAGA ACCTGATCGC AGAGGTCGTA CGCCGCTATC CGGTGAGTGC CGCACGCGTT
GTGCAGTGTC TCATTGGGGT ACGCGTCGGT ATCCATCGAG ACGGCCGGTT CGATCTGGTC
GAACGCGGGG CTAGTCCATA TGAGGAATCT GAGCCGCGAA GGCCGCGGAA CATCATCATC
GATGAGGCCG GGAACATCGC GGGTGTCCTA TTGACAGTAG ACAGGGAAGT CTTGCGGGGA
AGCGGGGTCA TCGTCCATCC GTGGCTCACA TGGCACCTCG GATTACGTCG GGCACCGATG
ACCCGACGAT TCTCCGTCCC GGGAGGCGAC GGAGATGTGA TCACCGTCAG CCGTCATACA
AGCGGGGCAC AGTTCTCGAG CATGAAGTCT TTTGTGGACG ACATGGGCCT AGCCATAGGT
TGCCAGTTCG CCGTGCTTCT CCGCCTCGAC GAAGAGACAG CGTCGGTACG ACACACGTGC
AAACCCGATA CCTGCACGGC GAGCTGA
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| Protein sequence | MALWKSLSPR DQALHSRRAS GETLDSIGQS YGLSRERIRQ LISRGEKSWV DQVDALRPGW
RASVRQRFAV RPVVAESDFA DILPDSVGIV RGTLLRAAGA DRARTWAGPI DGIWSMDPSG
LAAQLRDLIA LAPFTDDDLD TAAANLEFPE NTPLRAILTH SRSPLVRGPH DYWLRRNARA
RDASYLWLLS EGEPRRIEPI VMAVGGNRNA VAEAMRRDSR FRQLRPEGTW ALTDWHVPGA
TEYTNAMDVV VDVLTERGPI TRKNLIAEVV RRYPVSAARV VQCLIGVRVG IHRDGRFDLV
ERGASPYEES EPRRPRNIII DEAGNIAGVL LTVDREVLRG SGVIVHPWLT WHLGLRRAPM
TRRFSVPGGD GDVITVSRHT SGAQFSSMKS FVDDMGLAIG CQFAVLLRLD EETASVRHTC
KPDTCTAS
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