12 homologs were found in PanDaTox collection
for query gene Nham_1996 on replicon NC_007964
Organism: Nitrobacter hamburgensis X14



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007958  RPD_0036  hypothetical protein  64.11 
 
 
886 aa  1086    Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_1996  hypothetical protein  100 
 
 
884 aa  1757    Nitrobacter hamburgensis X14  Bacteria  normal  0.573803  n/a   
 
 
-
 
NC_009720  Xaut_2986  hypothetical protein  47.68 
 
 
884 aa  773    Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.262988 
 
 
-
 
NC_010725  Mpop_3104  hypothetical protein  47.13 
 
 
884 aa  748    Methylobacterium populi BJ001  Bacteria  normal  0.238928  normal 
 
 
-
 
NC_011758  Mchl_5413  hypothetical protein  44.03 
 
 
886 aa  634  1e-180  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.871624  normal 
 
 
-
 
NC_009720  Xaut_0781  hypothetical protein  39.44 
 
 
886 aa  509  1e-143  Xanthobacter autotrophicus Py2  Bacteria  normal  0.384751  normal  0.165581 
 
 
-
 
NC_010718  Nther_0840  ATP-dependent nuclease subunit B-like protein  25.42 
 
 
1048 aa  66.2  0.000000002  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.564215  hitchhiker  0.00099262 
 
 
-
 
NC_007958  RPD_2180  hypothetical protein  57.81 
 
 
125 aa  60.8  0.0000001  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.729907 
 
 
-
 
NC_010644  Emin_1287  ATP-dependent nuclease subunit B-like protein  23.87 
 
 
994 aa  59.3  0.0000003  Elusimicrobium minutum Pei191  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_3877  hypothetical protein  27.73 
 
 
1151 aa  55.1  0.000006  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_4020  hypothetical protein  28.12 
 
 
1079 aa  54.7  0.000007  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3983  hypothetical protein  26.82 
 
 
1100 aa  53.5  0.00002  Anaeromyxobacter sp. K  Bacteria  normal  0.588967  n/a   
 
 
-
 
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