Gene RPD_2180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2180 
Symbol 
ID4022663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2434570 
End bp2434947 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content71% 
IMG OID637962374 
Producthypothetical protein 
Protein accessionYP_569316 
Protein GI91976657 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.729907 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGTCTC AGATCCTCGA TCTGATCCCT CACACGGTGC TGGCCGGCCG CACGGCGCGG 
ACGGCGGCGG CGCGTTCGAG CGAGCTTGGC GTGCAGATCA TGACGATGGG GCAGTTGGCG
GCGCGACTCG CGGGCGGGTT GCTGCGCCCC GTCGATCTGG AAGTGCTGCA AGAGGCGATC
TCGGCGGCCC TGCCGGTGGT CGACATGGGC GACTGGAGCG ATCGAGCTGC TGCCCGGGAT
GCCGGGCGCG GTGACGGCGA CCTTCGACAA GACGTGGCGG GCGGGCGTCG ACCTTTCGGC
GGCGACACAT CCCCGGCTGG CGGCTGGCGG CTGGCGCCCT GGAGCAGGAG GTGGTCGTCC
GGTTGCCGGC GTCGATGA
 
Protein sequence
MASQILDLIP HTVLAGRTAR TAAARSSELG VQIMTMGQLA ARLAGGLLRP VDLEVLQEAI 
SAALPVVDMG DWSDRAAARD AGRGDGDLRQ DVAGGRRPFG GDTSPAGGWR LAPWSRRWSS
GCRRR