22 homologs were found in PanDaTox collection
for query gene Mnod_4112 on replicon NC_011894
Organism: Methylobacterium nodulans ORS 2060



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011894  Mnod_4112  hypothetical protein  100 
 
 		 127 aa  251  2.0000000000000002e-66  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
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NC_011894  Mnod_4229  hypothetical protein  94.87 
 
 		 136 aa  219  9.999999999999999e-57  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
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NC_007964  Nham_2399  hypothetical protein  35.64 
 
 		 111 aa  61.2  0.000000005  Nitrobacter hamburgensis X14  Bacteria  normal  0.406444  n/a   
 
 
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NC_010580  Bind_3744  hypothetical protein  33.33 
 
 		 120 aa  58.2  0.00000003  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  1 
 
 
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NC_009636  Smed_1233  ribonucleotide-diphosphate reductase subunit alpha  35.79 
 
 		 1263 aa  45.4  0.0002  Sinorhizobium medicae WSM419  Bacteria  normal  0.521746  normal  0.0561989 
 
 
-
 
NC_011369  Rleg2_1413  ribonucleotide-diphosphate reductase subunit alpha  34.74 
 
 		 1271 aa  44.3  0.0005  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.114125  normal  0.496027 
 
 
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NC_010581  Bind_1955  ribonucleotide-diphosphate reductase subunit alpha  35.79 
 
 		 1236 aa  44.7  0.0005  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.226018  normal  1 
 
 
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NC_009667  Oant_2131  ribonucleotide-diphosphate reductase subunit alpha  35.79 
 
 		 1263 aa  43.9  0.0008  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_009505  BOV_1008  ribonucleotide-diphosphate reductase subunit alpha  35.79 
 
 		 1264 aa  43.5  0.0009  Brucella ovis ATCC 25840  Bacteria  normal  1  n/a   
 
 
-
 
NC_004310  BR1043  ribonucleotide-diphosphate reductase subunit alpha  35.79 
 
 		 1264 aa  43.5  0.001  Brucella suis 1330  Bacteria  normal  1  n/a   
 
 
-
 
NC_012850  Rleg_1589  ribonucleotide-diphosphate reductase subunit alpha  34.74 
 
 		 1271 aa  43.5  0.001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.872862 
 
 
-
 
NC_009380  Strop_1453  vitamin B12-dependent ribonucleotide reductase  28.81 
 
 		 963 aa  42.7  0.002  Salinispora tropica CNB-440  Bacteria  normal  1  normal  0.745934 
 
 
-
 
NC_009719  Plav_3299  ribonucleotide-diphosphate reductase subunit alpha  30.48 
 
 		 1244 aa  42.7  0.002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.0441324  normal  0.905318 
 
 
-
 
NC_008254  Meso_1332  ribonucleotide-diphosphate reductase subunit alpha  34.74 
 
 		 1258 aa  42.4  0.002  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009953  Sare_1411  vitamin B12-dependent ribonucleotide reductase  30.53 
 
 		 962 aa  42.7  0.002  Salinispora arenicola CNS-205  Bacteria  normal  0.0560908  decreased coverage  0.00000497983 
 
 
-
 
NC_007958  RPD_2912  ribonucleotide-diphosphate reductase subunit alpha  31.73 
 
 		 1256 aa  41.6  0.004  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.824334  normal  0.16669 
 
 
-
 
NC_011666  Msil_0184  ribonucleotide-diphosphate reductase subunit alpha  40.74 
 
 		 1230 aa  41.2  0.005  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_013757  Gobs_3898  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent  30.53 
 
 		 951 aa  40.4  0.008  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_009952  Dshi_1785  ribonucleotide-diphosphate reductase subunit alpha  31.58 
 
 		 1224 aa  40.4  0.008  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.395663  normal  1 
 
 
-
 
NC_007925  RPC_2380  ribonucleotide-diphosphate reductase subunit alpha  30.77 
 
 		 1262 aa  40.4  0.008  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
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NC_007778  RPB_2544  ribonucleotide-diphosphate reductase subunit alpha  30.77 
 
 		 1257 aa  40.4  0.008  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.944514  normal  1 
 
 
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NC_007406  Nwi_1571  ribonucleotide-diphosphate reductase subunit alpha  31.73 
 
 		 1265 aa  40.4  0.009  Nitrobacter winogradskyi Nb-255  Bacteria  normal  1  normal  1 
 
 
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