| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2544 |
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| Symbol | |
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| ID | 3910333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 2914986 |
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| End bp | 2918759 |
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| Gene Length | 3774 bp |
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| Protein Length | 1257 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637884442 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_486159 |
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| Protein GI | 86749663 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.944514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCG AACGGCGCTA CACCACCGAC GGCCAGTCAC CCTATGCGGC GATTCAGTTC
CGGCTGAGGA CGAGTGAGAT CCGCAATCCG GACGGCTCCG TGGTGTTCCG CCTCGAAAAT
GTCGAAGTGC CCGAGGGCTG GTCGCAGGTC GCCTCCGACG TGCTGGCGCA GAAGTATTTC
CGCAAGGCCG GCGTCGCCGC GCGCTTGAAG AAGGTCGAGG AAGAGACCGT GCCGTCCTGG
CTGTGGCGCT CGGTGCCCGA CACCGAGGCG CTCGCCGCCC TGCCCGAGGC CGAGCGTTTC
ACCTCCGAAC ATTCGTCCAA GCAGGTGTTC GACCGCCTCG CCGGCTGCTG GACCTATTGG
GGCTGGAAGG GCGATTACTT CTCGTCCGAA GACGACGCCC GCGCGTTCTA CGACGAACTG
CGCTACATGC TGGCGTCGCA GATGGTCGCG CCGAATTCGC CGCAATGGTT CAACACCGGC
CTGCACTGGG CCTACGGCGT CGACGGCCCC GGCCAGGGCC ACTATTACGT CGACTACAAG
ACCGGCAAGC TGACCAAGTC GAAATCCGCC TACGAGCATC CGCAGCCGCA CGCCTGCTTC
ATCCAGGGCA TCGAGGACGA CCTCGTCAAC GAGGGCGGCA TCATGGACCT GTGGGTGCGT
GAGGCGCGGC TGTTCAAATA CGGCTCCGGC ACCGGCTCGA ACTTCTCGCG GCTGCGCGGC
GAAGGCGAGC GCCTGTCGGG CGGCGGCCGC TCCTCGGGCC TGATGAGCTT CCTCAAAATC
GGCGACCGCG CCGCCGGCGC GATCAAGAGC GGAGGCACCA CGCGGCGCGC CGCCAAGATG
GTGGTGGTCG ACGCCGACCA TCCGGATATC GAGGCCTATA TCGACTGGAA GGTGAAGGAG
GAGCAGAAGG TCGCGGCGCT CGTCACCGGC TCCAAGCTCA ACCAGAAGCA CCTCAAGGCG
ATCCTGAAGG CCTGCGTCAA TTGCCAGGGC TCCGGCGACG ACTGCTTCGA TCCCGAGAAG
AACCCGGCGC TGCGCCGCGA GGTCAAGATC GCCCGCCGCG CGCTGGTGAC CGATGCGATG
ATCAAGCGCG TCATCCAGTA TGCCAAGCAG GGCTACAAGG AGATCGACTT CCCGATCTAT
GACACCGATT GGGATAGCGA GGCCTACCTC ACCGTCTCCG GCCAGAACTC CAACAACTCC
GTCTCGCTGA AGGACGACTT TTTGCGCGCG GTGGAGACCG ACGGCGACTG GAATCTCACC
AGCCGCACCA CCAAGAAGGT GATGAAGACG GTCAAGGCCC GCGACCTGTG GGAGAAGATC
GGCACCGCCG CCTGGGCCAG CGCCGATCCC GGCCTGCACT TCAACAGCAC GATGAACGAC
TGGCACACCT GCAAGGCGTC GGGCGACATC CGCGCCAGCA ATCCGTGCTC GGAATACATG
TTCCTGGATG ATACCGCCTG CAATCTGGCG TCGGCGAACC TGCTGACCTT CTACGACACC
ACCGCCAATG TGTTCGACCT GCCCGCCTAC GAGCATCTGT GCCGGCTGTG GACCGTGGTG
CTGGAAATCT CGGTGCTGAT GGCGCAGTTC CCGTCCAAGC AGATCGCCGA GCTGTCTTAC
GAATTCCGCA CGCTCGGCCT CGGCTTCGCC AATATCGGCG GCCTCTTGAT GACCATGGGC
CTGTCCTACG ACTCCAAGGA AGGCCGCGCG CTGTGCGGCG CGCTGTCGGC GATCATGACC
GGCGTGTCGT ATGCGACCTC GGCCGAGATG GCCGCAAAGC TCGGCCCGTT CCCGGGCTAC
AAGAAGAACG CCGCGCATAT GCTGCGCGTG ATCCGCAATC ACCGCCGCGC CGCCCATGGC
GAGAGCCGCG GCTATGAGGC GCTGTCGGTG GCGCCGGTGC CGCTCGACCA CGCCGGCTGC
CCGATCCCCG AGGCGATCGC GCATGCCAAG GCGGCGTGGG ACAAGGCGCT CGAACTCGGC
GAGCTGCACG GCTATCGCAA CGCCCAGACC ACGGTCGTGG CGCCGACCGG CACCATCGGC
CTGGTGATGG ATTGCGACAC CACCGGCATC GAGCCCGATT TCGCGCTGGT GAAATTCAAG
AAGCTTGCGG GTGGCGGCTA CTGGAAGATC ATCAACCGCG CGGTGCCGGC CGCCTTGCGC
ATCCTCGGCT ATCCGGAAAA CCAGATCGCC GAGATCGAGG CCTACGCGGT CGGCCACGGC
TCGCTCAGCA ACGCGCCGGC GATCAACCGT TCGACGCTCA AAGCCAAGGG CTTCACCGAC
GAGGCGCTGG CGAAGGTCGA GGCCGCGCTG CCGACCGCCT TCGACATCAA ATTCGCCTTC
AACAAATGGA CCTTCGGCGA GGACTTCCTG CGCGAGACGC TGAAGCTCGA CGCCGAGGCG
ATCGCCGCGC CGAACTTCGA CCTGTTGGCC GCGATCGGCT TTTCCAAGCG CGAGATCGAG
GCCGCCAACA TCCACATCTG CGGCGCCATG ACCGTGGAAG GTGCGCCGCA CCTGAAGGCC
GAGCACTACA GCGTGTTCGA TTGCGCCAAT CCCTGCGGCA AGGTCGGCAA GCGCTATCTG
TCGGTCGAGA GCCACATCCG GATGATGGCG GCGGCGCAGC CGTTCATCTC GGGCGCGATC
AGCAAGACCA TCAACATGCC GAACGACGCC ACCGTGGAGG ACTGCAAGTC CGCCTACATG
CTGTCGTGGA AGCTCGCGCT GAAGGCCAAT GCCCTGTATC GCGACGGCTC GAAGCTGTCG
CAGCCGTTGA ACTCGCAGCT GATCGCCGAC GACGACGAGG ACGACGACGC GCTCGACAAT
TTCCTGGAGA AGCCGATGGC GGCGCGCACC GCCCAGATCT CCGAGAAGGT GGTGGAGCGC
CTGGTCGAGC GCATCGTGGT GATGCGCGAG CGCGAGAAGA TGCCGGATCG CCGCAAGGGT
TACACCCAGA AGGCGGTGGT CGGCGGCCAC AAGGTCTATC TGCGCACCGG CGAATATGAC
GACGGCCGGA TCGGCGAGAT CTTCATCGAC ATGCACAAGG AAGGTGCCGC ACTTCGCTCC
TTCATCAACA ATTTCGCGAT CGCGGTGTCG CTCGGCCTGC AATACGGCGT GCCGCTCGAG
GAATATGTCG ACGCCTTCAC CTTCACCCGG TTCGAGCCCG CCGGCCCGGT CCAGGGCAAC
GACTCGATCA AGTATGCGAC GTCGATCCTC GACTACGTGT TCCGCGAACT CGCCGTGAGC
TACATGGGCC GGTTCGACCT CGCCCATGTC GATCCCAGCG AGACCGGCTT CGACGCCATC
GGCAAGGGCG TCGACGAAGG CAAGGCGCCG GAAGGCACGC CGTCCGGCCA GCACGCCGCG
ACCAAGTACC TGTCGAAGGG CCTGACCCGC TCGCGCACCG ACAATCTGGT GGTGATGCGC
AGCACGCCGG CGACGCCGGA TGCCGGCTCG TCTCCGGTGA AGATGGCCTA CTCGCAGCCG
GACAGCCACG CCAAGTCGAC CTCGCGGATC GGCGACGTCC TCGAAGGCGC CACCGCGCTG
AAGCAGGAAG CCGACCACGA CCTGTCGCCG ACCGAAAAGC TCGAAGCCCT GCAATGGAGC
CGCGCCGGCG CCGCCCAGGC CCAGCCCGCA GCCTCCAAAG CCGAACGCCG CGCCGAAGCC
AAGGCGCGGG GTTACGAGGG CGACTCGTGC GGCGAATGCG GGAATTTCAC GCTGGTGCGG
AACGGGACGT GTATGAAGTG CGATACGTGC GGGAGCACGA CGGGGTGTAG TTGA
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| Protein sequence | MKIERRYTTD GQSPYAAIQF RLRTSEIRNP DGSVVFRLEN VEVPEGWSQV ASDVLAQKYF
RKAGVAARLK KVEEETVPSW LWRSVPDTEA LAALPEAERF TSEHSSKQVF DRLAGCWTYW
GWKGDYFSSE DDARAFYDEL RYMLASQMVA PNSPQWFNTG LHWAYGVDGP GQGHYYVDYK
TGKLTKSKSA YEHPQPHACF IQGIEDDLVN EGGIMDLWVR EARLFKYGSG TGSNFSRLRG
EGERLSGGGR SSGLMSFLKI GDRAAGAIKS GGTTRRAAKM VVVDADHPDI EAYIDWKVKE
EQKVAALVTG SKLNQKHLKA ILKACVNCQG SGDDCFDPEK NPALRREVKI ARRALVTDAM
IKRVIQYAKQ GYKEIDFPIY DTDWDSEAYL TVSGQNSNNS VSLKDDFLRA VETDGDWNLT
SRTTKKVMKT VKARDLWEKI GTAAWASADP GLHFNSTMND WHTCKASGDI RASNPCSEYM
FLDDTACNLA SANLLTFYDT TANVFDLPAY EHLCRLWTVV LEISVLMAQF PSKQIAELSY
EFRTLGLGFA NIGGLLMTMG LSYDSKEGRA LCGALSAIMT GVSYATSAEM AAKLGPFPGY
KKNAAHMLRV IRNHRRAAHG ESRGYEALSV APVPLDHAGC PIPEAIAHAK AAWDKALELG
ELHGYRNAQT TVVAPTGTIG LVMDCDTTGI EPDFALVKFK KLAGGGYWKI INRAVPAALR
ILGYPENQIA EIEAYAVGHG SLSNAPAINR STLKAKGFTD EALAKVEAAL PTAFDIKFAF
NKWTFGEDFL RETLKLDAEA IAAPNFDLLA AIGFSKREIE AANIHICGAM TVEGAPHLKA
EHYSVFDCAN PCGKVGKRYL SVESHIRMMA AAQPFISGAI SKTINMPNDA TVEDCKSAYM
LSWKLALKAN ALYRDGSKLS QPLNSQLIAD DDEDDDALDN FLEKPMAART AQISEKVVER
LVERIVVMRE REKMPDRRKG YTQKAVVGGH KVYLRTGEYD DGRIGEIFID MHKEGAALRS
FINNFAIAVS LGLQYGVPLE EYVDAFTFTR FEPAGPVQGN DSIKYATSIL DYVFRELAVS
YMGRFDLAHV DPSETGFDAI GKGVDEGKAP EGTPSGQHAA TKYLSKGLTR SRTDNLVVMR
STPATPDAGS SPVKMAYSQP DSHAKSTSRI GDVLEGATAL KQEADHDLSP TEKLEALQWS
RAGAAQAQPA ASKAERRAEA KARGYEGDSC GECGNFTLVR NGTCMKCDTC GSTTGCS
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